RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ANKS1BQ7Z6G8 1248 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 CIR1Q86X95 450 aaPredicted RBP6.1□□□□□ -1.43
SSX3-201ENST00000298396 DDX42Q86XP3 938 aaKnown RBP eCLIP6.1□□□□□ -1.43
SSX3-201ENST00000298396 TMEM25Q86YD3 366 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 SFTPA1Q8IWL2 248 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 REXO1L1PQ8IX06 675 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 RHOT2Q8IXI1 618 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 ADGRG2Q8IZP9 1017 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 KIAA1958Q8N8K9 716 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 DEPDC1BQ8WUY9 529 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 EZH1Q92800 747 aaPredicted RBP6.1□□□□□ -1.43
SSX3-201ENST00000298396 CD101Q93033 1021 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 IGSF8Q969P0 613 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 NXPE3Q969Y0 559 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 AZIN2Q96A70 460 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 E2F7Q96AV8 911 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 LMLNQ96KR4 655 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 BTN2A3PQ96KV6 586 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 UHRF1Q96T88 793 aaPredicted RBP6.1□□□□□ -1.43
SSX3-201ENST00000298396 SNRNP25Q9BV90 132 aaKnown RBP6.1□□□□□ -1.43
SSX3-201ENST00000298396 TRIM62Q9BVG3 475 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 TRMT61BQ9BVS5 477 aaKnown RBP6.1□□□□□ -1.43
SSX3-201ENST00000298396 NACA2Q9H009 215 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 TKTL2Q9H0I9 626 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 ECT2Q9H8V3 914 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 MRPL47Q9HD33 250 aaKnown RBP6.1□□□□□ -1.43
SSX3-201ENST00000298396 DUS2Q9NX74 493 aaKnown RBP6.1□□□□□ -1.43
SSX3-201ENST00000298396 PCSK1NQ9UHG2 260 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 FZD10Q9ULW2 581 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 SORCS3Q9UPU3 1222 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 PPP2R2CQ9Y2T4 447 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 SH3BP1Q9Y3L3 701 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 PAXBP1Q9Y5B6 917 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.1□□□□□ -1.43
SSX3-201ENST00000298396 CAPN6Q9Y6Q1 641 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 CACNA1HO95180 2353 aa6.1□□□□□ -1.43
SSX3-201ENST00000298396 GON4LQ3T8J9 2241 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 USP34Q70CQ2 3546 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 IGLV3-10A0A075B6K4 115 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 A6NHS1 94 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 C3orf70A6NLC5 250 aaPredicted RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 TMEM110-MUSTN1A8MSY1 372 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 OIP5O43482 229 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 BUB1O43683 1085 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 TSPAN3O60637 253 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 CNTN5O94779 1100 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 MOCS3O95396 460 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 F9P00740 461 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 CD48P09326 243 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 COMTP21964 271 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 MAPK1P28482 360 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 HOXC13P31276 330 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 L1CAMP32004 1257 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 CCR1P32246 355 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 GBP1P32455 592 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 MAN1A1P33908 653 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 GJA4P35212 333 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 PCK1P35558 622 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 SLC6A11P48066 632 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 KPNA1P52294 538 aaPredicted RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 RPS24P62847 133 aaKnown RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 ZXDAP98168 799 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 RUNX3Q13761 415 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 MESDQ14696 234 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 PDGFRLQ15198 375 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 SPA17Q15506 151 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 SMTNL2Q2TAL5 461 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 C5orf22Q49AR2 442 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 ARHGAP29Q52LW3 1261 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 ALFQ53S48 1182 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 BRMS1LQ5PSV4 323 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 ADGRF1Q5T601 910 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 ZNF385CQ66K41 422 aaPredicted RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 RAP1GAP2Q684P5 730 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 C11orf63Q6NUN7 778 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 FBXL22Q6P050 247 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 CC2D1AQ6P1N0 951 aaPredicted RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 ZNF662Q6ZS27 426 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 TPGS1Q6ZTW0 290 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 SLFN11Q7Z7L1 901 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 LGI2Q8N0V4 545 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 C17orf53Q8N3J3 647 aaPredicted RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 CPXM2Q8N436 756 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 OR52K2Q8NGK3 314 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 FAM71BQ8TC56 605 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 ATP2A3Q93084 1043 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 BHMTQ93088 406 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 NTAN1Q96AB6 310 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 OTUB2Q96DC9 234 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 DCLK3Q9C098 648 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 WDCPQ9H6R7 721 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 FBRSL1Q9HCM7 1045 aaKnown RBP6.09□□□□□ -1.43
SSX3-201ENST00000298396 TRPV5Q9NQA5 729 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 SPHK2Q9NRA0 654 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 HEBP1Q9NRV9 189 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.09□□□□□ -1.43
SSX3-201ENST00000298396 PLK2Q9NYY3 685 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 IP6K2Q9UHH9 426 aa6.09□□□□□ -1.43
SSX3-201ENST00000298396 FBXO10Q9UK96 956 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms