RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 PASD1Q8IV76 773 aa16.88■□□□□ 0.29
NPM1-201ENST00000296930 OR2I1PQ8NGU4 316 aa16.88■□□□□ 0.29
NPM1-201ENST00000296930 MYO19Q96H55 970 aa16.88■□□□□ 0.29
NPM1-201ENST00000296930 SLC2A13Q96QE2 648 aa16.88■□□□□ 0.29
NPM1-201ENST00000296930 FAM204AQ9H8W3 233 aa16.88■□□□□ 0.29
NPM1-201ENST00000296930 CEP83Q9Y592 693 aa16.88■□□□□ 0.29
NPM1-201ENST00000296930 KCNU1A8MYU2 1149 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 F5H5T6 163 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 ZSCAN12O43309 604 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 IPO7O95373 1038 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 ABCB4P21439 1286 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 CCR1P32246 355 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 ACSL1P33121 698 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 KRT83P78385 493 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 GRIK2Q13002 908 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 HNRNPDQ14103 355 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 SPA17Q15506 151 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 ST3GAL2Q16842 350 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 PITRM1Q5JRX3 1037 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 DEFB106AQ8N104 65 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 BTBD1Q9H0C5 482 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 RSPH9Q9H1X1 276 aaPredicted RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 DDIT4Q9NX09 232 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 EIF2B4Q9UI10 523 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 SCML1Q9UN30 329 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 USP24Q9UPU5 2620 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 KNL1Q8NG31 2342 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 RNASEH1O60930 286 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 GJB3O75712 270 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 SRPRAP08240 638 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 CD59P13987 128 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 TNFAIP3P21580 790 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 MTA1Q13330 715 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 HNRNPA1L2Q32P51 320 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 TTC39BQ5VTQ0 682 aaPredicted RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 OR6B2Q6IFH4 312 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 ALKBH5Q6P6C2 394 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 ZNF677Q86XU0 584 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
NPM1-201ENST00000296930 RNF34Q969K3 372 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 MRGPRX3Q96LB0 322 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 PCDHB18PQ96TA0 734 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 TFR2Q9UP52 801 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 ERVW-1Q9UQF0 538 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 PCDHA13Q9Y5I0 950 aa16.87■□□□□ 0.29
NPM1-201ENST00000296930 RCCD1A6NED2 376 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 SEMA4FO95754 770 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 SFSWAPQ12872 951 aaKnown RBP16.86■□□□□ 0.29
NPM1-201ENST00000296930 SLC12A1Q13621 1099 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 OLFML1Q6UWY5 402 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 FAM183BPQ6ZVS7 135 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 C1orf216Q8TAB5 229 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 SNX19Q92543 992 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 PRMT1Q99873 361 aaKnown RBP16.86■□□□□ 0.29
NPM1-201ENST00000296930 MTG2Q9H4K7 406 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 C6orf106Q9H6K1 298 aaPredicted RBP16.86■□□□□ 0.29
NPM1-201ENST00000296930 SYNCQ9H7C4 482 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 SGK2Q9HBY8 427 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 WASF3Q9UPY6 502 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 NCKAP1Q9Y2A7 1128 aa16.86■□□□□ 0.29
NPM1-201ENST00000296930 SYNJ2BP-COX16A0A087WUM0 186 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 CCP110O43303 1012 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 GRAP2O75791 330 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 VAV2P52735 878 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 SIM1P81133 766 aaPredicted RBP16.85■□□□□ 0.29
NPM1-201ENST00000296930 ECT2LQ008S8 904 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 RABGAP1LQ5R372 815 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 CCDC122Q5T0U0 273 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 FRYQ5TBA9 3013 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 RNF219Q5W0B1 726 aaPredicted RBP16.85■□□□□ 0.29
NPM1-201ENST00000296930 IL27RAQ6UWB1 636 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 SLC26A9Q7LBE3 791 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 SEPT11Q9NVA2 429 aaKnown RBP16.85■□□□□ 0.29
NPM1-201ENST00000296930 TAS2R14Q9NYV8 317 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 COX16Q9P0S2 106 aa16.85■□□□□ 0.29
NPM1-201ENST00000296930 NYNRINQ9P2P1 1898 aaKnown RBP16.85■□□□□ 0.29
NPM1-201ENST00000296930 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.85■□□□□ 0.29
NPM1-201ENST00000296930 SPAARA0A1B0GVQ0 90 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 TARSL2A2RTX5 802 aaKnown RBP16.84■□□□□ 0.29
NPM1-201ENST00000296930 SIN3BO75182 1162 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 DAB1O75553 588 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 ERBB2P04626 1255 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 ARHGAP25P42331 645 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 MAGEA1P43355 309 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 OXCT1P55809 520 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 SLC6A3Q01959 620 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 PTPN20Q4JDL3 420 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 KIAA1328Q86T90 577 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 DNAAF5Q86Y56 855 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 ZDHHC17Q8IUH5 632 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 PACSIN1Q9BY11 444 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 LACRTQ9GZZ8 138 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 PABPC3Q9H361 631 aaKnown RBP16.84■□□□□ 0.29
NPM1-201ENST00000296930 EDDM13A0A1B0GTR0 161 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 A0A1B0GVM2 712 aa16.84■□□□□ 0.29
NPM1-201ENST00000296930 TCAF2A6NFQ2 919 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms