RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 USP46P62068 366 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 POU6F1Q14863 301 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 PM20D1Q6GTS8 502 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 NAPRTQ6XQN6 538 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 ARHGAP12Q8IWW6 846 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 PPP1R14CQ8TAE6 165 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 NSMCE1Q8WV22 266 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 WDR60Q8WVS4 1066 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 MTBPQ96DY7 904 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 SLC9A7Q96T83 725 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 SLC39A8Q9C0K1 460 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 BRD8Q9H0E9 1235 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 GBA3Q9H227 469 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 DMAP1Q9NPF5 467 aaPredicted RBP12.03□□□□□ -0.48
RHO-201ENST00000296271 EIF2B3Q9NR50 452 aaKnown RBP12.03□□□□□ -0.48
RHO-201ENST00000296271 CHST12Q9NRB3 414 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 SLC2A6Q9UGQ3 507 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 NOD1Q9Y239 953 aa12.03□□□□□ -0.48
RHO-201ENST00000296271 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.03□□□□□ -0.48
RHO-201ENST00000296271 MYLKQ15746 1914 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 A0A1W2PQH9 124 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 TMEM88BA6NKF7 163 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 SEPT4O43236 478 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 TGDSO95455 350 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 SERPINB9P50453 376 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 PEX6Q13608 980 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 ITGA9Q13797 1035 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 ARL13BQ3SXY8 428 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 KHDC1Q4VXA5 237 aaKnown RBP12.02□□□□□ -0.48
RHO-201ENST00000296271 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 ZNF280DQ6N043 979 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 TIFABQ6ZNK6 161 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 IPMKQ8NFU5 416 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 PGAP3Q96FM1 320 aaPredicted RBP12.02□□□□□ -0.48
RHO-201ENST00000296271 PPP1R36Q96LQ0 422 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 TEKT5Q96M29 485 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 TSPAN18Q96SJ8 248 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 EPAS1Q99814 870 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 FTHL17Q9BXU8 183 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 CASS4Q9NQ75 786 aa12.02□□□□□ -0.48
RHO-201ENST00000296271 C20orf96Q9NUD7 363 aaPredicted RBP12.02□□□□□ -0.48
RHO-201ENST00000296271 PRR5-ARHGAP8B1AHC4 643 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 KLF11O14901 512 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 GSC2O15499 205 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 PHGDHO43175 533 aaKnown RBP12.02□□□□□ -0.49
RHO-201ENST00000296271 TOMM70O94826 608 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 PROCP04070 461 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 RPL9P32969 192 aaKnown RBP12.02□□□□□ -0.49
RHO-201ENST00000296271 PBX3P40426 434 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 GATMP50440 423 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 ARHGAP8P85298 464 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 TUSC3Q13454 348 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 IRF5Q13568 498 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 CLLU1OSQ5K130 101 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 TFAP2DQ7Z6R9 452 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 DENND6AQ8IWF6 608 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.02□□□□□ -0.49
RHO-201ENST00000296271 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 ZNF398Q8TD17 642 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 CDKL2Q92772 493 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 INPP5DQ92835 1189 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 HDAC11Q96DB2 347 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 NSL1Q96IY1 281 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 FCRL2Q96LA5 508 aaPredicted RBP12.02□□□□□ -0.49
RHO-201ENST00000296271 C7orf26Q96N11 449 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 RILPQ96NA2 401 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 TXNDC16Q9P2K2 825 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
RHO-201ENST00000296271 SF3B1O75533 1304 aaKnown RBP eCLIP12.02□□□□□ -0.49
RHO-201ENST00000296271 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.01□□□□□ -0.49
RHO-201ENST00000296271 TNFRSF10BO14763 440 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 PMPCBO75439 489 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 GJB3O75712 270 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 GABRB3P28472 473 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 GLRBP48167 497 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 SLC1A6P48664 564 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 USP4Q13107 963 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 CTBP1Q13363 440 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 CCSAPQ6IQ19 270 aaPredicted RBP12.01□□□□□ -0.49
RHO-201ENST00000296271 TMEM135Q86UB9 458 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 METTL23Q86XA0 190 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 POU5F2Q8N7G0 328 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 SORT1Q99523 831 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 LRRC40Q9H9A6 602 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 MAN1C1Q9NR34 630 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 MKS1Q9NXB0 559 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 BFARQ9NZS9 450 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 ABT1Q9ULW3 272 aaKnown RBP12.01□□□□□ -0.49
RHO-201ENST00000296271 PTPRDP23468 1912 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 M0QZQ0 153 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 GYG2O15488 501 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 IRAK2O43187 625 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 ZNF623O75123 536 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 ESRRAP11474 423 aaPredicted RBP12.01□□□□□ -0.49
RHO-201ENST00000296271 SLC8A1P32418 973 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 GP5P40197 560 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 ARPP19P56211 112 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms