RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 POU6F1Q14863 301 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 ACSBG2Q5FVE4 666 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 SPANXN3Q5MJ09 141 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 RAPH1Q70E73 1250 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 METTL23Q86XA0 190 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 RASAL3Q86YV0 1011 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 SLC9A7Q96T83 725 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 ADAM2Q99965 735 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 DCDC2Q9UHG0 476 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 SLC39A10Q9ULF5 831 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 WFS1O76024 890 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 GLRBP48167 497 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 PTDSS1P48651 473 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 USP4Q13107 963 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 CBLBQ13191 982 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 THOC5Q13769 683 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 EP400NLQ6ZTU2 488 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 KCNMB4Q86W47 210 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 CCNJLQ8IV13 435 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 SLC25A41Q8N5S1 370 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 PIWIL2Q8TC59 973 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 PPP4R1Q8TF05 950 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 CPNE1Q99829 537 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 GBA3Q9H227 469 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 MAN1C1Q9NR34 630 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 A0A096LPK6 155 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 PROCP04070 461 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 RALBP11234 206 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 MX2P20592 715 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 CRHR2Q13324 411 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 RAB41Q5JT25 222 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 TSPAN18Q96SJ8 248 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 RBBP8Q99708 897 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 TUBB6Q9BUF5 446 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 COPG2Q9UBF2 871 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 TSC2P49815 1807 aa16.13■□□□□ 0.17
NCKIPSD-201ENST00000294129 SF3B1O75533 1304 aaKnown RBP eCLIP16.12■□□□□ 0.171e-8■■■■■ 103.4
NCKIPSD-201ENST00000294129 ZCWPW2A0A1B0GU75 182 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 PHGDHO43175 533 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 HNRNPCL1O60812 293 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 DUSP11O75319 330 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 PRKCGP05129 697 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 NCF2P19878 526 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 SERPINB6P35237 376 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 GRIK1P39086 918 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 PSEN1P49768 467 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 PEX6Q13608 980 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 WASHC2DQ5SRD0 308 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 OVOS1Q6IE37 1185 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 STMN2Q93045 179 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 TLE6Q9H808 572 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 DMAP1Q9NPF5 467 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 NDFIP2Q9NV92 336 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 NOD1Q9Y239 953 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 PTCH2Q9Y6C5 1203 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 CPA3P15088 417 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 SPRP35270 261 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 CXCR3P49682 368 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 SCAPQ12770 1279 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 MPP3Q13368 585 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 KRT72Q14CN4 511 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 SPDYAQ5MJ70 313 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 CNTD1Q8N815 330 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 SHKBP1Q8TBC3 707 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 MPP6Q9NZW5 540 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 G3BP2Q9UN86 482 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 GABRQQ9UN88 632 aa16.12■□□□□ 0.17
NCKIPSD-201ENST00000294129 SPECC1L-ADORA2AF8WAN1 911 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 GPR182O15218 404 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 PMPCBO75439 489 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 F9P00740 461 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 SERPINE1P05121 402 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 HOXC8P31273 242 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 GALNT2Q10471 571 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 INTS6LQ5JSJ4 861 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 GRTP1Q5TC63 336 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 ITPRIPL1Q6GPH6 555 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 SPATA6LQ8N4H0 392 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 ACMSDQ8TDX5 336 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 TRIB2Q92519 343 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 HDAC11Q96DB2 347 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 CASS4Q9NQ75 786 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 APOBEC2Q9Y235 224 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 GIT1Q9Y2X7 761 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 LOC100653049A0A140TA62 436 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 CAPN14A8MX76 684 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 KRT34O76011 436 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 IL1BP01584 269 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 GNAZP19086 355 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 ZNF460Q14592 562 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 CYS1Q717R9 158 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 ATPAF2Q8N5M1 289 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 SPC25Q9HBM1 224 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 SLC24A3Q9HC58 644 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 NCAM2O15394 837 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 ZMPSTE24O75844 475 aa16.11■□□□□ 0.17
NCKIPSD-201ENST00000294129 SERPINB8P50452 374 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms