RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 MSANTD2Q6P1R3 559 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 GAS2L3Q86XJ1 694 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 SCML4Q8N228 414 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 FAM131CQ96AQ9 280 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 RPL10LQ96L21 214 aaKnown RBP12.38□□□□□ -0.43
SPC25-201ENST00000282074 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 DUSP23Q9BVJ7 150 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 EXOC1Q9NV70 894 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 UCKL1Q9NWZ5 548 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 NLGN3Q9NZ94 848 aa12.38□□□□□ -0.43
SPC25-201ENST00000282074 TULP2O00295 520 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 LZTS3O60299 673 aaPredicted RBP12.37□□□□□ -0.43
SPC25-201ENST00000282074 PIAS2O75928 621 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 THEGLP0DJG4 465 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 RPS24P62847 133 aaKnown RBP12.37□□□□□ -0.43
SPC25-201ENST00000282074 SULT2A1Q06520 285 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 PPP3CAQ08209 521 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 FSCBQ5H9T9 825 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 KRT39Q6A163 491 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 SHC4Q6S5L8 630 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 ATG14Q6ZNE5 492 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 ARL14Q8N4G2 192 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 KCTD13Q8WZ19 329 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 TATDN2Q93075 761 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 APOLD1Q96LR9 279 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 PRICKLE1Q96MT3 831 aaPredicted RBP12.37□□□□□ -0.43
SPC25-201ENST00000282074 ZNF396Q96N95 335 aaPredicted RBP12.37□□□□□ -0.43
SPC25-201ENST00000282074 MMRN2Q9H8L6 949 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 PREBQ9HCU5 417 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 NCKIPSDQ9NZQ3 722 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 TJP2Q9UDY2 1190 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 TSPAN16Q9UKR8 245 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 SATB2Q9UPW6 733 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 PCDHGA8Q9Y5G5 932 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 AHCTF1Q8WYP5 2266 aa12.37□□□□□ -0.43
SPC25-201ENST00000282074 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
SPC25-201ENST00000282074 SCAMP1O15126 338 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 LUC7L3O95232 432 aaKnown RBP12.36□□□□□ -0.43
SPC25-201ENST00000282074 TRIM49P0CI25 452 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 TRIM49CP0CI26 452 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 KRT10P13645 584 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 LCP1P13796 627 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 GTF2H1P32780 548 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
SPC25-201ENST00000282074 DAOAP59103 153 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 SKOR1P84550 965 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 SLC12A1Q13621 1099 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 ARL13BQ3SXY8 428 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 POM121L1PQ3SYA9 428 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 MS4A13Q5J8X5 152 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 COLEC12Q5KU26 742 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 C6orf132Q5T0Z8 1188 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 TPCN2Q8NHX9 752 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 OR8D1Q8WZ84 308 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 IRGQQ8WZA9 623 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 IFT43Q96FT9 208 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 CCNL2Q96S94 520 aaPredicted RBP12.36□□□□□ -0.43
SPC25-201ENST00000282074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.36□□□□□ -0.43
SPC25-201ENST00000282074 FAM13BQ9NYF5 915 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 TRAF3IP3Q9Y228 551 aa12.36□□□□□ -0.43
SPC25-201ENST00000282074 C1QTNF3-AMACRE9PGA6 284 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 SLC31A1O15431 190 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 YEATS4O95619 227 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 GIMD1P0DJR0 217 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 SETSIPP0DME0 302 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 SFTPCP11686 197 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 CD19P15391 556 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 ZNF18P17022 549 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 RPL13P26373 211 aaKnown RBP12.35□□□□□ -0.43
SPC25-201ENST00000282074 INHBCP55103 352 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 CCDC15Q0P6D6 951 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 NADSYN1Q6IA69 706 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 NEK5Q6P3R8 708 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 ZNF574Q6ZN55 896 aaPredicted RBP12.35□□□□□ -0.43
SPC25-201ENST00000282074 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 APCDD1Q8J025 514 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 CFAP52Q8N1V2 620 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 UBA3Q8TBC4 463 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
SPC25-201ENST00000282074 ARHGAP9Q9BRR9 750 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 CALN1Q9BXU9 219 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 TRIM4Q9C037 500 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 RRAGDQ9NQL2 400 aaPredicted RBP12.35□□□□□ -0.43
SPC25-201ENST00000282074 KIAA1257Q9ULG3 409 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 CA5BQ9Y2D0 317 aa12.35□□□□□ -0.43
SPC25-201ENST00000282074 K7ESM1 405 aa12.34□□□□□ -0.43
SPC25-201ENST00000282074 ALOX15BO15296 676 aa12.34□□□□□ -0.43
SPC25-201ENST00000282074 KLRC4O43908 158 aa12.34□□□□□ -0.43
SPC25-201ENST00000282074 STX10O60499 249 aa12.34□□□□□ -0.43
SPC25-201ENST00000282074 GJB6O95452 261 aa12.34□□□□□ -0.43
SPC25-201ENST00000282074 LTFP02788 710 aa12.34□□□□□ -0.43
SPC25-201ENST00000282074 MYF5P13349 255 aa12.34□□□□□ -0.43
SPC25-201ENST00000282074 NR2F2P24468 414 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms