RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PRPSAP1Q14558 356 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 DEFB115Q30KQ5 88 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 LACTB2Q53H82 288 aaPredicted RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 VWA5B1Q5TIE3 1220 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 LRRC8BQ6P9F7 803 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 RFWD3Q6PCD5 774 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 CD300LGQ6UXG3 332 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 LIMS2Q7Z4I7 341 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 SCD5Q86SK9 330 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 DENND6AQ8IWF6 608 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 GBP7Q8N8V2 638 aaPredicted RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 EXOC2Q96KP1 924 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 FTHL17Q9BXU8 183 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 C20orf27Q9GZN8 174 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 NMUR2Q9GZQ4 415 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 PPCSQ9HAB8 311 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 NOD2Q9HC29 1040 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 MAN1C1Q9NR34 630 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 PRKAG3Q9UGI9 489 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 SLC2A6Q9UGQ3 507 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 MTO1Q9Y2Z2 717 aaKnown RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 A0A1W2PQ45 241 aaPredicted RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 A0A1W2PQY0 241 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 FAM159BA6NKW6 160 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 NEMP1O14524 444 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 ITM2AO43736 263 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 ZNF623O75123 536 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 UNC5CO95185 931 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 PRKCHP24723 683 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 SCNN1AP37088 669 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 GLUD2P49448 558 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 NEK3P51956 506 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 TAF10Q12962 218 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 NOGQ13253 232 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 STX3Q13277 289 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 CNGA3Q16281 694 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 TAF12Q16514 161 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 CES4AQ5XG92 561 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 ZNF280DQ6N043 979 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 KIAA1841Q6NSI8 718 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 BHLHA9Q7RTU4 235 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 KCNMB4Q86W47 210 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 LONP2Q86WA8 852 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 CRLF3Q8IUI8 442 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 C10orf107Q8IVU9 208 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 PLD6Q8N2A8 252 aaKnown RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 POU5F2Q8N7G0 328 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 OR6P1Q8NGX9 317 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 LINC01599Q8WXQ3 324 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 MCUR1Q96AQ8 359 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 ZNF419Q96HQ0 510 aaPredicted RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 SUSD3Q96L08 255 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 EBF4Q9BQW3 602 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 PLCD4Q9BRC7 762 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 FRMD8Q9BZ67 464 aaPredicted RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 BRD8Q9H0E9 1235 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 LRRC40Q9H9A6 602 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 ABCC13Q9NSE7 274 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 ARL8BQ9NVJ2 186 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 SMPD4Q9NXE4 827 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 TMEM216Q9P0N5 145 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 IPO11Q9UI26 975 aaKnown RBP6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 DNAJC16Q9Y2G8 782 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 PCDHB7Q9Y5E2 793 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 ACTL7AQ9Y615 435 aa6.17□□□□□ -1.42
TNFSF4-201ENST00000281834 J3KR12 359 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 DIAPH2O60879 1101 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ATP6V1G2O95670 118 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 AP2A1O95782 977 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 C1QAP02745 245 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ESRRAP11474 423 aaPredicted RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 NCF2P19878 526 aaPredicted RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ETV4P43268 484 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 CCR10P46092 362 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 TM4SF4P48230 202 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 RPL34P49207 117 aaKnown RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 PAPOLAP51003 745 aaKnown RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 TBX4P57082 545 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 PPIDQ08752 370 aaKnown RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 MPP3Q13368 585 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 USP10Q14694 798 aaKnown RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 PAFAH1B3Q15102 231 aaKnown RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ANKRD20A4Q4UJ75 823 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ALFQ53S48 1182 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 RAB41Q5JT25 222 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 RNF43Q68DV7 783 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ITPRIPL1Q6GPH6 555 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 FSTL4Q6MZW2 842 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ESRP1Q6NXG1 681 aaKnown RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 FAM171BQ6P995 826 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 CLNKQ7Z7G1 428 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 CHSY1Q86X52 802 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 KIRREL3Q8IZU9 778 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 KLHDC9Q8NEP7 349 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 EXT2Q93063 718 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 LRRC39Q96DD0 335 aa6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 ZNF512Q96ME7 567 aaPredicted RBP6.16□□□□□ -1.42
TNFSF4-201ENST00000281834 NDNQ99608 321 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms