RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 WDR5BQ86VZ2 330 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 RYBPQ8N488 228 aaPredicted RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 DCAF4L2Q8NA75 395 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 ACRBPQ8NEB7 543 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 OR52K2Q8NGK3 314 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 SLC35G2Q8TBE7 412 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 RLN3Q8WXF3 142 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 PRCCQ92733 491 aaPredicted RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 SIPA1Q96FS4 1042 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 CELF6Q96J87 481 aaKnown RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 CCDC114Q96M63 670 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 KCTD15Q96SI1 283 aaPredicted RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 FEM1AQ9BSK4 669 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 CALN1Q9BXU9 219 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 PRDM16Q9HAZ2 1276 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 PPARGC1AQ9UBK2 798 aaKnown RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 SUN2Q9UH99 717 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 LCMT1Q9UIC8 334 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 VPS51Q9UID3 782 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 GMEB2Q9UKD1 530 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 HCN2Q9UL51 889 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 NENFQ9UMX5 172 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 CYP8B1Q9UNU6 501 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 TFR2Q9UP52 801 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 SMG5Q9UPR3 1016 aaKnown RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 TBC1D30Q9Y2I9 924 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 PCDHA13Q9Y5I0 950 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 EDDM13A0A1B0GTR0 161 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 A0A1W2PQF6 199 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 ILVBLA1L0T0 632 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 EIF3CLB5ME19 914 aaKnown RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 DCLK1O15075 740 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 BUB1O43683 1085 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 NRDCO43847 1150 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 SIN3BO75182 1162 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 NDUFS2O75306 463 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 PROSCO94903 275 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 LMNAP02545 664 aaKnown RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 DNTTP04053 509 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 KRT1P04264 644 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 PTMAP06454 111 aaKnown RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 RARAP10276 462 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TDGF1P13385 188 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 GOT1P17174 413 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 GLDCP23378 1020 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 IL1R2P27930 398 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 CNR2P34972 360 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 PCK1P35558 622 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 ACVRL1P37023 503 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 PLA2G5P39877 138 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 NBL1P41271 181 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 PSMD8P48556 350 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 CDH6P55285 790 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 NRG1Q02297 640 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 BYSLQ13895 437 aaKnown RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 POLD3Q15054 466 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 ELF2Q15723 593 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 POM121L1PQ3SYA9 428 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TTC31Q49AM3 519 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 C5orf22Q49AR2 442 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 MANEALQ5VSG8 457 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 ZNF776Q68DI1 518 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 RNF43Q68DV7 783 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TXNRD3NBQ6F5E7 133 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 RETSATQ6NUM9 610 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 RAD9BQ6WBX8 426 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 RFX8Q6ZV50 586 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 Q6ZVU0 165 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 KIAA0907Q7Z7F0 614 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 CPNE8Q86YQ8 564 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TMPRSS6Q8IU80 811 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 MMAAQ8IVH4 418 aaKnown RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 ZNF683Q8IZ20 524 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TXLNBQ8N3L3 684 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 FAM160A2Q8N612 972 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 DEFB119Q8N690 84 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 ARFGAP1Q8N6T3 406 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 PAF1Q8N7H5 531 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 NIPA2Q8N8Q9 360 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 RTL3Q8N8U3 475 aaKnown RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 KCTD6Q8NC69 237 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 ZBTB44Q8NCP5 570 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 OR2T3Q8NH03 318 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 GAB3Q8WWW8 586 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TTC17Q96AE7 1141 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 LMLNQ96KR4 655 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 MRGPRX1Q96LB2 322 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 EIF3CQ99613 913 aaKnown RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 DESI2Q9BSY9 194 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TNKS2Q9H2K2 1166 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 SP110Q9HB58 689 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 NDFIP2Q9NV92 336 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 TMEM248Q9NWD8 314 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 DONSONQ9NYP3 566 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 EBF1Q9UH73 591 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 SLCO3A1Q9UIG8 710 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 INTUQ9ULD6 942 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 FARP1Q9Y4F1 1045 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 HYOU1Q9Y4L1 999 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms