RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 CNTN6Q9UQ52 1028 aa14.65□□□□□ -0.06
COMMD4-201ENST00000267935 TMEM131Q92545 1883 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 PRAMEF26H0Y7S4 382 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 ALOX15BO15296 676 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 THAP12O43422 761 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 LATO43561 262 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 RNGTTO60942 597 aaKnown RBP14.64□□□□□ -0.07
COMMD4-201ENST00000267935 PDGFRAP16234 1089 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 SEMG2Q02383 582 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 TARDBPQ13148 414 aaKnown RBP eCLIP14.64□□□□□ -0.07
COMMD4-201ENST00000267935 DNAJC3Q13217 504 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 SETMARQ53H47 684 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-201ENST00000267935 DENND1BQ6P3S1 775 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 ARHGEF19Q8IW93 802 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 NELFBQ8WX92 580 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 MYEOVQ96EZ4 313 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 KLHDC7BQ96G42 594 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 CCDC114Q96M63 670 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 RPRD1AQ96P16 312 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-201ENST00000267935 NOX5Q96PH1 765 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 UBL7Q96S82 380 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-201ENST00000267935 CYTH4Q9UIA0 394 aa14.64□□□□□ -0.07
COMMD4-201ENST00000267935 XPO7Q9UIA9 1087 aaKnown RBP14.64□□□□□ -0.07
COMMD4-201ENST00000267935 FREM2Q5SZK8 3169 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 E5RJQ4 531 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 CALCAP01258 141 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 USP8P40818 1118 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 ACADVLP49748 655 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 STK19P49842 368 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-201ENST00000267935 KRT83P78385 493 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 BNIP3Q12983 259 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 RTP5Q14D33 572 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 SHBQ15464 509 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 HES3Q5TGS1 186 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 TSC1Q92574 1164 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 INTS2Q9H0H0 1204 aaKnown RBP14.63□□□□□ -0.07
COMMD4-201ENST00000267935 TMEM51Q9NW97 253 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 ASNSD1Q9NWL6 643 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 DDIT4Q9NX09 232 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 MAN1B1Q9UKM7 699 aa14.63□□□□□ -0.07
COMMD4-201ENST00000267935 TK2O00142 265 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 WNT9AO14904 365 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 MCF2LO15068 1137 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 PLRG1O43660 514 aaKnown RBP14.62□□□□□ -0.07
COMMD4-201ENST00000267935 ATP9BO43861 1147 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 CLDN11O75508 207 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 IGLV3-25P01717 112 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 GNA15P30679 374 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 MAT2AP31153 395 aaKnown RBP14.62□□□□□ -0.07
COMMD4-201ENST00000267935 ACTN2P35609 894 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 EIF2S3P41091 472 aaKnown RBP14.62□□□□□ -0.07
COMMD4-201ENST00000267935 C19orf57Q0VDD7 668 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 DLG2Q15700 870 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 SMYD5Q6GMV2 418 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 TTI2Q6NXR4 508 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 FBXL22Q6P050 247 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 NEK5Q6P3R8 708 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 FBXL19Q6PCT2 694 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 TRIM69Q86WT6 500 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 TRIM59Q8IWR1 403 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 DEFB106AQ8N104 65 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 PIP4K2CQ8TBX8 421 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 FRS2Q8WU20 508 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 FGF11Q92914 225 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 KREMEN1Q96MU8 473 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 PRMT1Q99873 361 aaKnown RBP14.62□□□□□ -0.07
COMMD4-201ENST00000267935 FEM1AQ9BSK4 669 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 SRRTQ9BXP5 876 aaKnown RBP14.62□□□□□ -0.07
COMMD4-201ENST00000267935 PREBQ9HCU5 417 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 DYRK4Q9NR20 520 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 EVA1BQ9NVM1 165 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 VPS28Q9UK41 221 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 PPM1HQ9ULR3 514 aa14.62□□□□□ -0.07
COMMD4-201ENST00000267935 MUC22E2RYF6 1773 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-201ENST00000267935 SYNJ2BP-COX16A0A087WUM0 186 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 C10orf142B7Z368 130 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 CBX4O00257 560 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 HSF2BPO75031 334 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 RTN2O75298 545 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 GLDCP23378 1020 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 DRD3P35462 400 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 MARSP56192 900 aaKnown RBP14.61□□□□□ -0.07
COMMD4-201ENST00000267935 DAB2P98082 770 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 CNTN1Q12860 1018 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 ZNF211Q13398 564 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-201ENST00000267935 AUHQ13825 339 aaKnown RBP14.61□□□□□ -0.07
COMMD4-201ENST00000267935 CREBRFQ8IUR6 639 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 LSM14AQ8ND56 463 aaKnown RBP14.61□□□□□ -0.07
COMMD4-201ENST00000267935 FAM174AQ8TBP5 190 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 PPP1R13BQ96KQ4 1090 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 MUC3BQ9H195 1237 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 RRN3Q9NYV6 651 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 COX16Q9P0S2 106 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 ARHGAP20Q9P2F6 1191 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 CLCA2Q9UQC9 943 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 PAXBP1Q9Y5B6 917 aa14.61□□□□□ -0.07
COMMD4-201ENST00000267935 COL5A1P20908 1838 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-201ENST00000267935 PPP1R3GB7ZBB8 358 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 BNIP3LO60238 219 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 ALPPL2P10696 532 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms