RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MATN3O15232 486 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 TLL1O43897 1013 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 ACSL4O60488 711 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 CSPG5O95196 566 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 AP2A1O95782 977 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 OAS1P00973 400 aaKnown RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 STX2P32856 288 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 PPP3CCP48454 512 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 NDST2P52849 883 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 ITIH5Q86UX2 942 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 LRRC49Q8IUZ0 686 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 LGI2Q8N0V4 545 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 CNTD1Q8N815 330 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 PLD4Q96BZ4 506 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 MYEOVQ96EZ4 313 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 CYTH2Q99418 400 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 PAFAH2Q99487 392 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 MLPHQ9BV36 600 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 RNF38Q9H0F5 515 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 IPO11Q9UI26 975 aaKnown RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 TTLL3Q9Y4R7 772 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 RASA4BC9J798 803 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 RASA4O43374 803 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 CXCL14O95715 111 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 SLC6A4P31645 630 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 CTNNB1P35222 781 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 SLC11A2P49281 568 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 SESN2P58004 480 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 OLIG2Q13516 323 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 KBTBD12Q3ZCT8 623 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 FAM133BQ5BKY9 247 aaKnown RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 KCTD11Q693B1 232 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 UNC5AQ6ZN44 842 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 OTOP3Q7RTS5 596 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 TMEM150AQ86TG1 271 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 DENND1CQ8IV53 801 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 SRRM1Q8IYB3 904 aaKnown RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 MDM1Q8TC05 714 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 HERVK_113Q902F9 699 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 MAML1Q92585 1016 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 STAMBPL1Q96FJ0 436 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 HMCESQ96FZ2 354 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 ZNF419Q96HQ0 510 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 IL12RB2Q99665 862 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 TRIM56Q9BRZ2 755 aaKnown RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 PLAC1Q9HBJ0 212 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 ZNF334Q9HCZ1 680 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-201ENST00000266589 GKN1Q9NS71 199 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 ZNF212Q9UDV6 495 aa11.82□□□□□ -0.52
SCAF11-201ENST00000266589 SDR42E2A6NKP2 422 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ERI2A8K979 691 aaKnown RBP11.81□□□□□ -0.52
SCAF11-201ENST00000266589 USP12O75317 370 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 STC2O76061 302 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 SUN1O94901 812 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ADH1AP07327 375 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 GSTA2P09210 222 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 IRF1P10914 325 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 CREB1P16220 341 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 MGAT1P26572 445 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 OR1E1P30953 314 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 CORO1AP31146 461 aaKnown RBP11.81□□□□□ -0.52
SCAF11-201ENST00000266589 CRADDP78560 199 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 NR1H3Q13133 447 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 PRPSAP1Q14558 356 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 RASA2Q15283 850 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ANO4Q32M45 955 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 CASC4Q6P4E1 433 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 RFWD3Q6PCD5 774 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ZNF771Q7L3S4 317 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ZNF354CQ86Y25 554 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCAF11-201ENST00000266589 OR52K1Q8NGK4 314 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 TCF25Q9BQ70 676 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 DHRS4Q9BTZ2 278 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ALG13Q9NP73 1137 aaKnown RBP11.81□□□□□ -0.52
SCAF11-201ENST00000266589 ENTPD7Q9NQZ7 604 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 UBP1Q9NZI7 540 aa11.81□□□□□ -0.52
SCAF11-201ENST00000266589 RAMP2O60895 175 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 NEBLO76041 1014 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 F11P03951 625 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 HLA-DQB2P05538 268 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 CHN1P15882 459 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 KRT15P19012 456 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 LSP1P33241 339 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 MSH2P43246 934 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 MAPKAPK2P49137 400 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 C5orf22Q49AR2 442 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 PRPF39Q86UA1 669 aaKnown RBP11.8□□□□□ -0.52
SCAF11-201ENST00000266589 CFAP52Q8N1V2 620 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 GSDMBQ8TAX9 411 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 PHOSPHO2Q8TCD6 241 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 OXNAD1Q96HP4 312 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-201ENST00000266589 KLHL5Q96PQ7 755 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 KLF16Q9BXK1 252 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-201ENST00000266589 SP110Q9HB58 689 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 IL21Q9HBE4 155 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms