RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 APRTP07741 180 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 NUDT17P0C025 328 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 OR1E1P30953 314 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 BMP8BP34820 402 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 SGSHP51688 502 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 YBEYP58557 167 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 RPS24P62847 133 aaKnown RBP23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 SLC5A9Q2M3M2 681 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 PARP15Q460N3 678 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 PRSS36Q5K4E3 855 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 FNBP1LQ5T0N5 605 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 GPR158Q5T848 1215 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 ZNF697Q5TEC3 545 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 PPP1R21Q6ZMI0 780 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 CHST9Q7L1S5 443 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 MCUQ8NE86 351 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 TEKT5Q96M29 485 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 FRMD8Q9BZ67 464 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 SAYSD1Q9NPB0 183 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 NINJ2Q9NZG7 142 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 IPO11Q9UI26 975 aaKnown RBP23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 ARHGAP26Q9UNA1 814 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 MYO7AQ13402 2215 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 TRDMT1O14717 391 aaKnown RBP23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 RAMP2O60895 175 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 PSMB4P28070 264 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 CD68P34810 354 aaPredicted RBP23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 MAGEA4P43358 317 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 FAM193AP78312 1265 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 TEAD2Q15562 447 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 SYCP2LQ5T4T6 812 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 TTC39BQ5VTQ0 682 aaPredicted RBP23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 DENND2CQ68D51 928 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 HTR3DQ70Z44 454 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 MAML1Q92585 1016 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 ZBTB9Q96C00 473 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 IL12RB2Q99665 862 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 GBA3Q9H227 469 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 EIF2B3Q9NR50 452 aaKnown RBP23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 LSM7Q9UK45 103 aaKnown RBP23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 DOCK6Q96HP0 2047 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 CCDC195A0A1B0GUA6 201 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 ALOX15BO15296 676 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 ZBTB24O43167 697 aaPredicted RBP23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 CLDN11O75508 207 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 TTC4O95801 387 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 JCHAINP01591 159 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 CCNB1P14635 433 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 NRIP1P48552 1158 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 GPS2Q13227 327 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 KCNC3Q14003 757 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 SLC29A2Q14542 456 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 POLD3Q15054 466 aaPredicted RBP23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 MSS51Q4VC12 460 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 ARHGAP15Q53QZ3 475 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 CNTD1Q8N815 330 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 SH3GL2Q99962 352 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 GORASP1Q9BQQ3 440 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 TASP1Q9H6P5 420 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 CFAP97Q9P2B7 532 aa23.41■■□□□ 1.34
SMARCB1-201ENST00000263121 A0A1B0GVM2 712 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 TCAF2A6NFQ2 919 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 SYF2O95926 243 aaKnown RBP23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 PEX11BO96011 259 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 NTHL1P78549 312 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 CDK16Q00536 496 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 PDIA2Q13087 525 aaKnown RBP23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 FASTKD3Q14CZ7 662 aaKnown RBP23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 ITPRIPL1Q6GPH6 555 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 GRASPQ7Z6J2 395 aaPredicted RBP23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 CMTM8Q8IZV2 173 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 PDIK1LQ8N165 341 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 ZNF419Q96HQ0 510 aaPredicted RBP23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 AGAP3Q96P47 875 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 SERPINB12Q96P63 405 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 RUFY1Q96T51 708 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 OGFRQ9NZT2 677 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 ZNF510Q9Y2H8 683 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 CEP290O15078 2479 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 CHD5Q8TDI0 1954 aa23.4■■□□□ 1.34
SMARCB1-201ENST00000263121 E7EVH7 732 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 H3BQF6 201 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 LEFTY2O00292 366 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 TSPAN3O60637 253 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 SERINC3Q13530 473 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 KYNUQ16719 465 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 TNS4Q8IZW8 715 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 VN1R2Q8NFZ6 395 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 OR2W6PQ8NHA6 318 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 C9orf72Q96LT7 481 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 MED4Q9NPJ6 270 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 RSPH14Q9UHP6 348 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 SH3BP1Q9Y3L3 701 aa23.39■■□□□ 1.34
SMARCB1-201ENST00000263121 RANBP2P49792 3224 aaKnown RBP23.39■■□□□ 1.33
SMARCB1-201ENST00000263121 SPDYE4A6NLX3 237 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 F5H423 210 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 SCAMP3O14828 347 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 CACNG3O60359 315 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ZNF844Q08AG5 666 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ANO4Q32M45 955 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms