RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 SLC2A13Q96QE2 648 aa17.09■□□□□ 0.33
PDE4C-201ENST00000262805 VCXQ9H320 206 aa17.09■□□□□ 0.33
PDE4C-201ENST00000262805 WDR6Q9NNW5 1121 aaKnown RBP17.09■□□□□ 0.33
PDE4C-201ENST00000262805 CHRAC1Q9NRG0 131 aa17.09■□□□□ 0.33
PDE4C-201ENST00000262805 ADAMTS6Q9UKP5 1117 aa17.09■□□□□ 0.33
PDE4C-201ENST00000262805 PACSIN3Q9UKS6 424 aa17.09■□□□□ 0.33
PDE4C-201ENST00000262805 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
PDE4C-201ENST00000262805 CCNT2O60583 730 aaKnown RBP17.08■□□□□ 0.33
PDE4C-201ENST00000262805 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.33
PDE4C-201ENST00000262805 CRABP2P29373 138 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 ANKRD20A4Q4UJ75 823 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 LPCAT4Q643R3 524 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.33
PDE4C-201ENST00000262805 ISL2Q96A47 359 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 ZFP42Q96MM3 310 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 OR52B2Q96RD2 323 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 KCNK16Q96T55 309 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 ULBP1Q9BZM6 244 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 EBF3Q9H4W6 596 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 LRRC40Q9H9A6 602 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.33
PDE4C-201ENST00000262805 NRCAMQ92823 1304 aa17.08■□□□□ 0.33
PDE4C-201ENST00000262805 SMIM24O75264 130 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 CHRNGP07510 517 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 GARSP41250 739 aaKnown RBP17.08■□□□□ 0.32
PDE4C-201ENST00000262805 SERPINB8P50452 374 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 SNAPC2Q13487 334 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 CUL3Q13618 768 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 SNX17Q15036 470 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 PRAMEF19Q5SWL8 479 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 KCTD11Q693B1 232 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 TUBGCP5Q96RT8 1024 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 MED10Q9BTT4 135 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.32
PDE4C-201ENST00000262805 GOLGA8QA0A0J9YX86 632 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 GOLGA8OA6NCC3 632 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 MAGEA13PA6NCF6 341 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 MEIS3P2A8K0S8 358 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 GOLGA8NF8WBI6 632 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 PDHXO00330 501 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 HSPA4LO95757 839 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 C2P06681 752 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 LYNP07948 512 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 SPRP35270 261 aaPredicted RBP17.07■□□□□ 0.32
PDE4C-201ENST00000262805 BTKQ06187 659 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 SEMA3BQ13214 749 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 SV2CQ496J9 727 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 EPGNQ6UW88 154 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 CLEC14AQ86T13 490 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 ACTRT2Q8TDY3 377 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 MAML3Q96JK9 1138 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 CDH19Q9H159 772 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 CASS4Q9NQ75 786 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 CRTAC1Q9NQ79 661 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 DYNC1LI2O43237 492 aaPredicted RBP17.07■□□□□ 0.32
PDE4C-201ENST00000262805 FKBP6O75344 327 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 KCNE1P15382 129 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 NFKB1P19838 968 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 CYP2B6P20813 491 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 WARSP23381 471 aaKnown RBP17.07■□□□□ 0.32
PDE4C-201ENST00000262805 TPI1P60174 286 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 CCDC153Q494R4 210 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 SFT2D3Q587I9 215 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 DHDDSQ86SQ9 333 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 SMG8Q8ND04 991 aaKnown RBP17.07■□□□□ 0.32
PDE4C-201ENST00000262805 URGCPQ8TCY9 931 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 TSC22D3Q99576 134 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 FERMT1Q9BQL6 677 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 BFARQ9NZS9 450 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 DNAJB4Q9UDY4 337 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 POMPQ9Y244 141 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 IPPQ9Y573 584 aa17.07■□□□□ 0.32
PDE4C-201ENST00000262805 TIMM13Q9Y5L4 95 aaPredicted RBP17.07■□□□□ 0.32
PDE4C-201ENST00000262805 CEP350Q5VT06 3117 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 RRN3P2A6NIE6 340 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 TK2O00142 265 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 PTGESO14684 152 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 RNASEH1O60930 286 aaKnown RBP17.06■□□□□ 0.32
PDE4C-201ENST00000262805 NMBRP28336 390 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 PNPLA4P41247 253 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 CCNA1P78396 465 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 XKR4Q5GH76 650 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 SPNS2Q8IVW8 549 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 WDR55Q9H6Y2 383 aaPredicted RBP17.06■□□□□ 0.32
PDE4C-201ENST00000262805 IARS2Q9NSE4 1012 aaKnown RBP17.06■□□□□ 0.32
PDE4C-201ENST00000262805 C20orf96Q9NUD7 363 aaPredicted RBP17.06■□□□□ 0.32
PDE4C-201ENST00000262805 TREHO43280 583 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 USP17L7P0C7H9 530 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 GNAT1P11488 350 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 COX4I1P13073 169 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 SAT1P21673 171 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 MPSTP25325 297 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 PEX2P28328 305 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 PPIDQ08752 370 aaKnown RBP17.06■□□□□ 0.32
PDE4C-201ENST00000262805 TBL3Q12788 808 aaKnown RBP17.06■□□□□ 0.32
PDE4C-201ENST00000262805 ASPHQ12797 758 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 PPP2R5DQ14738 602 aa17.06■□□□□ 0.32
PDE4C-201ENST00000262805 KCNMB4Q86W47 210 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms