RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ADRA1BP35368 520 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 GARSP41250 739 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ASPHQ12797 758 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 DBN1Q16643 649 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 INSCQ1MX18 579 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ANKRD20A4Q4UJ75 823 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 TMCO4Q5TGY1 634 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ZNF560Q96MR9 790 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 OR52B2Q96RD2 323 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 TUBGCP5Q96RT8 1024 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 HNRNPABQ99729 332 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ULBP1Q9BZM6 244 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 WDR55Q9H6Y2 383 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 LRRC40Q9H9A6 602 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 RALGAPA2Q2PPJ7 1873 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 MAGEA13PA6NCF6 341 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 MEIS3P2A8K0S8 358 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 NEMP1O14524 444 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 AP2A1O95782 977 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 CHRM1P11229 460 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 LIMK2P53671 638 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 BNIPLQ7Z465 357 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 SPNS2Q8IVW8 549 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 SYT17Q9BSW7 474 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 MLPHQ9BV36 600 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 IARS2Q9NSE4 1012 aaKnown RBP16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 STAP1Q9ULZ2 295 aa16.71■□□□□ 0.27
TM9SF1-201ENST00000261789 PDHXO00330 501 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 C2P06681 752 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 LYNP07948 512 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 USP17L7P0C7H9 530 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 CRABP2P29373 138 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 SPRP35270 261 aaPredicted RBP16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 SERPINB5P36952 375 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 SNAPC2Q13487 334 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 CFAP157Q5JU67 520 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 TMEM135Q86UB9 458 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 OR6Y1Q8NGX8 325 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 URGCPQ8TCY9 931 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 EDEM1Q92611 657 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 IFT43Q96FT9 208 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 UNKQ9C0B0 810 aaKnown RBP16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 STN1Q9H668 368 aaKnown RBP16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 GPAMQ9HCL2 828 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 WDR6Q9NNW5 1121 aaKnown RBP16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 C20orf96Q9NUD7 363 aaPredicted RBP16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 BFARQ9NZS9 450 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 POMPQ9Y244 141 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 PCDHB12Q9Y5F1 795 aa16.71■□□□□ 0.26
TM9SF1-201ENST00000261789 TK2O00142 265 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 GNAT1P11488 350 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 NCAM1P13591 858 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 ALOX15P16050 662 aaPredicted RBP16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 NFKB1P19838 968 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 GLRBP48167 497 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 SERPINB8P50452 374 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 TPI1P60174 286 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 CCNA1P78396 465 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 NAB1Q13506 487 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 SNX17Q15036 470 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 SFT2D3Q587I9 215 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 UBXN11Q5T124 520 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 PGM2L1Q6PCE3 622 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 CMTM5Q96DZ9 223 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 CELF6Q96J87 481 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 CDH19Q9H159 772 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 DDX43Q9NXZ2 648 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 IPPQ9Y573 584 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 PLXNB2O15031 1838 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 TREHO43280 583 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 CCNT2O60583 730 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 RNASEH1O60930 286 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 FKBP6O75344 327 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 NMBRP28336 390 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 AVPR1AP37288 418 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 TBL3Q12788 808 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 CCDC153Q494R4 210 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 SV2CQ496J9 727 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 PPM1LQ5SGD2 360 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 EPGNQ6UW88 154 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 DHDDSQ86SQ9 333 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 ACTRT2Q8TDY3 377 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 MAML3Q96JK9 1138 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 RHOBTB2Q9BYZ6 727 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 DDIT4Q9NX09 232 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 SLC39A10Q9ULF5 831 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 NRCAMQ92823 1304 aa16.7■□□□□ 0.26
TM9SF1-201ENST00000261789 PHGDHO43175 533 aaKnown RBP16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 COX4I1P13073 169 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 MPSTP25325 297 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 PEX2P28328 305 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 SERPINB6P35237 376 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 MAGEA12P43365 314 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 KCNMB4Q86W47 210 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 TDRD5Q8NAT2 981 aaKnown RBP16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 USP33Q8TEY7 942 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 LENG8Q96PV6 779 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms