RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 ARHGAP22Q7Z5H3 698 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 PIGZQ86VD9 579 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 SPATA22Q8NHS9 363 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 CXorf38Q8TB03 319 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 GRIN3AQ8TCU5 1115 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 URGCPQ8TCY9 931 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 RNF34Q969K3 372 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 CDH19Q9H159 772 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 VCX3BQ9H321 246 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 VCX3AQ9NNX9 186 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 TLK1Q9UKI8 766 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 RUVBL2Q9Y230 463 aaKnown RBP13.5□□□□□ -0.25
PGBD1-201ENST00000259883 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 AP4B1Q9Y6B7 739 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 HBP1O60381 514 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 SEC24DO94855 1032 aaPredicted RBP13.5□□□□□ -0.25
PGBD1-201ENST00000259883 JCHAINP01591 159 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 NMBRP28336 390 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 FDFT1P37268 417 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 ETFBP38117 255 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 MAP3K7CLP57077 242 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 NIPAL4Q0D2K0 466 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 GRM3Q14832 879 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 RWDD4Q6NW29 188 aaKnown RBP13.5□□□□□ -0.25
PGBD1-201ENST00000259883 GK5Q6ZS86 529 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 DENND6AQ8IWF6 608 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 PQLC1Q8N2U9 271 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 ACTRT2Q8TDY3 377 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 LRRC39Q96DD0 335 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 SLC39A3Q9BRY0 314 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 BFARQ9NZS9 450 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 ZDHHC2Q9UIJ5 367 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 CYP2C8P10632 490 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 ADCYAP1R1P41586 468 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 MPP3Q13368 585 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 ANKRD20A4Q4UJ75 823 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
PGBD1-201ENST00000259883 RAB3IL1Q8TBN0 382 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 PPWD1Q96BP3 646 aaKnown RBP13.5□□□□□ -0.25
PGBD1-201ENST00000259883 SLC45A3Q96JT2 553 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 FTHL17Q9BXU8 183 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 LRRC4Q9HBW1 653 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 GPAMQ9HCL2 828 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 H3BNX3 289 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 CCL22O00626 93 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 SPTLC1O15269 473 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 LGALS2P05162 132 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 TPSB2P20231 275 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 MAGEA3P43357 314 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 MPP1Q00013 466 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 TPSAB1Q15661 275 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 DPYSL2Q16555 572 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 DGKDQ16760 1214 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 NADK2Q4G0N4 442 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 FSCBQ5H9T9 825 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 RNF169Q8NCN4 708 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 TSNARE1Q96NA8 513 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 PKP2Q99959 881 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 ACE2Q9BYF1 805 aaPredicted RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 NUDT5Q9UKK9 219 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 CSADQ9Y600 493 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 FER1L6Q2WGJ9 1857 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 LAMA2P24043 3122 aaKnown RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 MDM4O15151 490 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 CCNT2O60583 730 aaKnown RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 TSPAN1O60635 241 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 TRIM13O60858 407 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 CRTAMO95727 393 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 PTPN1P18031 435 aaKnown RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 NFKB1P19838 968 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 SPRP35270 261 aaPredicted RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 TMED1Q13445 227 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 BNC2Q6ZN30 1099 aaPredicted RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 KYQ8NBH2 561 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 IPMKQ8NFU5 416 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 ATP6V1E2Q96A05 226 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 RTP4Q96DX8 246 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 VPS39Q96JC1 886 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 KCNK16Q96T55 309 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 SLC4A5Q9BY07 1137 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 MRPL1Q9BYD6 325 aaKnown RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 FRMD8Q9BZ67 464 aaPredicted RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 ILKAPQ9H0C8 392 aaPredicted RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 CHST12Q9NRB3 414 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 DDX43Q9NXZ2 648 aaKnown RBP13.49□□□□□ -0.25
PGBD1-201ENST00000259883 CDY2AQ9Y6F7 541 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
PGBD1-201ENST00000259883 PTPRFP10586 1907 aa13.48□□□□□ -0.25
PGBD1-201ENST00000259883 DFFAO00273 331 aa13.48□□□□□ -0.25
PGBD1-201ENST00000259883 ZNF195O14628 629 aa13.48□□□□□ -0.25
PGBD1-201ENST00000259883 MT-CYBP00156 380 aaPredicted RBP13.48□□□□□ -0.25
PGBD1-201ENST00000259883 MCF2P10911 925 aa13.48□□□□□ -0.25
PGBD1-201ENST00000259883 ERCC2P18074 760 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms