RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 ZNF669Q96BR6 464 aaPredicted RBP17.32■□□□□ 0.36
CDK4-201ENST00000257904 NMD3Q96D46 503 aaKnown RBP17.32■□□□□ 0.36
CDK4-201ENST00000257904 LRGUKQ96M69 825 aa17.32■□□□□ 0.36
CDK4-201ENST00000257904 AGAP2Q99490 1192 aa17.32■□□□□ 0.36
CDK4-201ENST00000257904 GATA5Q9BWX5 397 aaPredicted RBP17.32■□□□□ 0.36
CDK4-201ENST00000257904 WDR55Q9H6Y2 383 aaPredicted RBP17.32■□□□□ 0.36
CDK4-201ENST00000257904 AKT3Q9Y243 479 aa17.32■□□□□ 0.36
CDK4-201ENST00000257904 MYO18AQ92614 2054 aaKnown RBP17.31■□□□□ 0.36
CDK4-201ENST00000257904 MATN2O00339 956 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 TSPAN1O60635 241 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 LTFP02788 710 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 TFAP2AP05549 437 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 F7P08709 466 aaPredicted RBP17.31■□□□□ 0.36
CDK4-201ENST00000257904 INSRRP14616 1297 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 RPL34P49207 117 aaKnown RBP17.31■□□□□ 0.36
CDK4-201ENST00000257904 GTF2A2P52657 109 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 THOP1P52888 689 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 BCAT1P54687 386 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 ADGRE1Q14246 886 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 FLOT2Q14254 428 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 DLG2Q15700 870 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 ZNF423Q2M1K9 1284 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 PABPC1LQ4VXU2 614 aaKnown RBP17.31■□□□□ 0.36
CDK4-201ENST00000257904 LRRC23Q53EV4 343 aaPredicted RBP17.31■□□□□ 0.36
CDK4-201ENST00000257904 ZFP1Q6P2D0 407 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 BNC2Q6ZN30 1099 aaPredicted RBP17.31■□□□□ 0.36
CDK4-201ENST00000257904 OR6B3Q8NGW1 331 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 SLC7A14Q8TBB6 771 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 URGCPQ8TCY9 931 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 ILKAPQ9H0C8 392 aaPredicted RBP17.31■□□□□ 0.36
CDK4-201ENST00000257904 PRDM12Q9H4Q4 367 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 CAB39LQ9H9S4 337 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 NMRAL1Q9HBL8 299 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 OXSMQ9NWU1 459 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 ERAP1Q9NZ08 941 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 PTTG2Q9NZH5 202 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 ATXN10Q9UBB4 475 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 RIMS3Q9UJD0 308 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 VPS28Q9UK41 221 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
CDK4-201ENST00000257904 VILLO15195 856 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 HCRTO43612 131 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 CRTAMO95727 393 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 CLPTM1O96005 669 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 VTNP04004 478 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 ADORA2BP29275 332 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 MRPS22P82650 360 aaKnown RBP17.3■□□□□ 0.36
CDK4-201ENST00000257904 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDK4-201ENST00000257904 PIGGQ5H8A4 983 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 ZNF484Q5JVG2 852 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 FASTKD5Q7L8L6 764 aaKnown RBP17.3■□□□□ 0.36
CDK4-201ENST00000257904 TMEM135Q86UB9 458 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 UNC93AQ86WB7 457 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 ANKRD52Q8NB46 1076 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 RP9Q8TA86 221 aaKnown RBP17.3■□□□□ 0.36
CDK4-201ENST00000257904 RNF139Q8WU17 664 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 AGAP3Q96P47 875 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 CXCL16Q9H2A7 254 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 SCN1AP35498 2009 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 ZCWPW2A0A1B0GU75 182 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 NEMP1O14524 444 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 HDAC3O15379 428 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 CREB3O43889 395 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 C2P06681 752 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 CHRNGP07510 517 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 XRCC1P18887 633 aaPredicted RBP17.3■□□□□ 0.36
CDK4-201ENST00000257904 MPSTP25325 297 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 MATKP42679 507 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 SULT1E1P49888 294 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 FRG1Q14331 258 aaKnown RBP17.3■□□□□ 0.36
CDK4-201ENST00000257904 LSM12Q3MHD2 195 aaKnown RBP17.3■□□□□ 0.36
CDK4-201ENST00000257904 TICAM1Q8IUC6 712 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 PSTKQ8IV42 348 aaKnown RBP17.3■□□□□ 0.36
CDK4-201ENST00000257904 CATSPER1Q8NEC5 780 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 HIC2Q96JB3 615 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 MPP4Q96JB8 637 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 CDRT15Q96T59 188 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 PLK2Q9NYY3 685 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 LZTS1Q9Y250 596 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 RAP2CQ9Y3L5 183 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 AP4B1Q9Y6B7 739 aa17.3■□□□□ 0.36
CDK4-201ENST00000257904 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 SLC22A2O15244 555 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 USP12O75317 370 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 PENKP01210 267 aaPredicted RBP17.29■□□□□ 0.36
CDK4-201ENST00000257904 ASLP04424 464 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 GRM5P41594 1212 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 ABCG1P45844 678 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 CLCN2P51788 898 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 CYLC2Q14093 348 aaPredicted RBP17.29■□□□□ 0.36
CDK4-201ENST00000257904 KCTD2Q14681 263 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 SLC25A52Q3SY17 297 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 SEL1L3Q68CR1 1132 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 RBM44Q6ZP01 1051 aaKnown RBP17.29■□□□□ 0.36
CDK4-201ENST00000257904 PID1Q7Z2X4 250 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 CPSF7Q8N684 471 aaKnown RBP17.29■□□□□ 0.36
CDK4-201ENST00000257904 ADCY4Q8NFM4 1077 aa17.29■□□□□ 0.36
CDK4-201ENST00000257904 FAM81AQ8TBF8 368 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms