RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CDKAL1Q5VV42 579 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ZBED3Q96IU2 234 aaPredicted RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ZBTB45Q96K62 511 aaPredicted RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 PNKPQ96T60 521 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC13A1Q9BZW2 595 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 KLHL28Q9NXS3 571 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 CLIC5Q9NZA1 410 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 AGO1Q9UL18 857 aaKnown RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 RPS6KL1Q9Y6S9 549 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 E5RJQ4 531 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 SPATA31C1P0DKV0 1188 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 PPP2R1BP30154 601 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 INPP5AQ14642 412 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 NIPAL1Q6NVV3 410 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 C16orf59Q7L2K0 433 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 KDELC2Q7Z4H8 507 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 EBNA1BP2Q99848 306 aaKnown RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM126AQ9BYI3 521 aaPredicted RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 PCBD2Q9H0N5 130 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ZDHHC7Q9NXF8 308 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 BACE2Q9Y5Z0 518 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 EDDM13A0A1B0GTR0 161 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 SOBPA7XYQ1 873 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 SMIM22K7EJ46 135 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 STAU1O95793 577 aaKnown RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 IQCF3P0C7M6 154 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNHIT3Q15649 155 aaPredicted RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 RD3Q7Z3Z2 195 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 CYP4Z1Q86W10 505 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 TRIB2Q92519 343 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 MAML1Q92585 1016 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ROGDIQ9GZN7 287 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 THAP2Q9H0W7 228 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 PCDHGC3Q9UN70 934 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 PLAAQ9Y263 795 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 TMX2-CTNND1H3BSU7 103 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 COX7A2P14406 83 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 BRCC3P46736 316 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 TTC7BQ86TV6 843 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 TATDN2Q93075 761 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 STRADBQ9C0K7 418 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 C6orf203Q9P0P8 240 aaPredicted RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 YIPF1Q9Y548 306 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 KLHL2O95198 593 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 MAGEA4P43358 317 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 CAPZA2P47755 286 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 POLD2P49005 469 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 KCNK10P57789 538 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 SKOR1P84550 965 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 FAXCQ5TGI0 409 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNF776Q68DI1 518 aaPredicted RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC36A4Q6YBV0 504 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 KIAA0895Q8NCT3 520 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 ACTRT1Q8TDG2 376 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 MCRS1Q96EZ8 462 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 MYO19Q96H55 970 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 ZFP42Q96MM3 310 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 IL12RB2Q99665 862 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 CPNE1Q99829 537 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 TBK1Q9UHD2 729 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 GPSM3Q9Y4H4 160 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 NR1D1P20393 614 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 VARSP26640 1264 aaKnown RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 BMPR1AP36894 532 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 PEX5P50542 639 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 GHRHRQ02643 423 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 BHLHB9Q6PI77 547 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 LRRC6Q86X45 466 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 TAGAPQ8N103 731 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 BADQ92934 168 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 PPWD1Q96BP3 646 aaKnown RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 PCDHB1Q9Y5F3 818 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 SNTNA6NMZ2 147 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 TRDMT1O14717 391 aaKnown RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNF623O75123 536 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 TACR2P21452 398 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 RPA3P35244 121 aaPredicted RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 OTUD4Q01804 1114 aaKnown RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 E2F4Q16254 413 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 USP49Q70CQ1 688 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM228AQ86W67 206 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 PHACTR1Q9C0D0 580 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 CATSPERZQ9NTU4 200 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 KLHL3Q9UH77 587 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
PRPF38A-201ENST00000257181 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms