RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 CELF6Q96J87 481 aaKnown RBP12.43□□□□□ -0.42
NIP7-201ENST00000254940 PRICKLE1Q96MT3 831 aaPredicted RBP12.43□□□□□ -0.42
NIP7-201ENST00000254940 RPRD1AQ96P16 312 aaPredicted RBP12.43□□□□□ -0.42
NIP7-201ENST00000254940 TRIM62Q9BVG3 475 aa12.43□□□□□ -0.42
NIP7-201ENST00000254940 ZFP14Q9HCL3 533 aa12.43□□□□□ -0.42
NIP7-201ENST00000254940 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
NIP7-201ENST00000254940 NOVA2Q9UNW9 492 aaKnown RBP12.43□□□□□ -0.42
NIP7-201ENST00000254940 RIPK2O43353 540 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 OPA1O60313 960 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 ACSL4O60488 711 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 LRIG2O94898 1065 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 F9P00740 461 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 TACR2P21452 398 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 GDI1P31150 447 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 ZNF77Q15935 545 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 LONRF1Q17RB8 773 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 ANKRD22Q5VYY1 191 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 ARCQ7LC44 396 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 PLD5Q8N7P1 536 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 TDRD5Q8NAT2 981 aaKnown RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 SLC35B2Q8TB61 432 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 TMBIM4Q9HC24 238 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 DUS2Q9NX74 493 aaKnown RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 ARHGEF38Q9NXL2 777 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 CWC15Q9P013 229 aaKnown RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 HBS1LQ9Y450 684 aaKnown RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 SHROOM3Q8TF72 1996 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 NEDD8-MDP1E9PL57 170 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 MYZAPP0CAP1 466 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 PCK1P35558 622 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 IFI35P80217 286 aaPredicted RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 ARL13BQ3SXY8 428 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 FAXCQ5TGI0 409 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 CELF5Q8N6W0 485 aaKnown RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 ATP6V0D2Q8N8Y2 350 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 DDI1Q8WTU0 396 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 MAIP1Q8WWC4 291 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.42□□□□□ -0.42
NIP7-201ENST00000254940 ATP6V1G3Q96LB4 118 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 CDK5RAP1Q96SZ6 601 aaKnown RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 ZDHHC4Q9NPG8 344 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 LSM7Q9UK45 103 aaKnown RBP12.42□□□□□ -0.42
NIP7-201ENST00000254940 MIA3Q5JRA6 1907 aa12.42□□□□□ -0.42
NIP7-201ENST00000254940 E9PAM4 449 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 EEF2KO00418 725 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 TBL1XO60907 577 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 POU2F2P09086 479 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 EPHB2P29323 1055 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 CETN2P41208 172 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 MESP2Q0VG99 397 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 LY6G5CQ5SRR4 150 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 KLHDC10Q6PID8 442 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 BBS12Q6ZW61 710 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 BEND5Q7L4P6 421 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 SFTPA1Q8IWL2 248 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 WFDC5Q8TCV5 224 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 BPIFB1Q8TDL5 484 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 GRK7Q8WTQ7 553 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 PLD4Q96BZ4 506 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 PGAP3Q96FM1 320 aaPredicted RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 BTN2A3PQ96KV6 586 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 RRN3Q9NYV6 651 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 GDE1Q9NZC3 331 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 MTRF1LQ9UGC7 380 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 GOLGA8KD6RF30 607 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 RBP3P10745 1247 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 ITIH2P19823 946 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 DDX6P26196 483 aaKnown RBP eCLIP12.41□□□□□ -0.42
NIP7-201ENST00000254940 SLC11A2P49281 568 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 TPI1P60174 286 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 EIF3EP60228 445 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 COPS2P61201 443 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 MAGOHP61326 146 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 PPP2R5DQ14738 602 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 SMAD2Q15796 467 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 LEXMQ3ZCV2 418 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 DENND2CQ68D51 928 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 OTOP3Q7RTS5 596 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 YAF2Q8IY57 180 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 CARNMT1Q8N4J0 409 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 OR52K2Q8NGK3 314 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 MDM1Q8TC05 714 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 DEPDC1BQ8WUY9 529 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 EXOC4Q96A65 974 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 MRRFQ96E11 262 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 MAK16Q9BXY0 300 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 WHRNQ9P202 907 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.41□□□□□ -0.42
NIP7-201ENST00000254940 TICRRQ7Z2Z1 1910 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 NCOR1O75376 2440 aa12.41□□□□□ -0.42
NIP7-201ENST00000254940 CREB1P16220 341 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 TAZQ16635 292 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 Q6ZNB5 142 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.4□□□□□ -0.42
NIP7-201ENST00000254940 CCDC89Q8N998 374 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 NECTIN4Q96NY8 510 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms