RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 GPNMBQ14956 572 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 ACCSLQ4AC99 568 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 KCTD11Q693B1 232 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 CMC1Q7Z7K0 106 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 CCNJLQ8IV13 435 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 DBF4BQ8NFT6 615 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 MFSD3Q96ES6 412 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 MIPEPQ99797 713 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 NMUR2Q9GZQ4 415 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 NEU3Q9UQ49 428 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 RANBP2P49792 3224 aaKnown RBP19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 CCDC78A2IDD5 438 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 M0QZQ0 153 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 EOMESO95936 686 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 KCNA4P22459 653 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 PDE1BQ01064 536 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 PREPLQ4J6C6 727 aaPredicted RBP19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 FASTKD1Q53R41 847 aaKnown RBP19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 ATG16L1Q676U5 607 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 GLB1LQ6UWU2 654 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 OTOP3Q7RTS5 596 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 FAM13CQ8NE31 585 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 IRGQQ8WZA9 623 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 PTCD3Q96EY7 689 aaKnown RBP19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 NAT9Q9BTE0 207 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 RRN3Q9NYV6 651 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 SFMBT1Q9UHJ3 866 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 DFFAO00273 331 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 NCAM2O15394 837 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 LYPLA1O75608 230 aaPredicted RBP19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 PRKCGP05129 697 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 MX2P20592 715 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 SLC5A3P53794 718 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 SPDYAQ5MJ70 313 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 ZSCAN18Q8TBC5 510 aaPredicted RBP19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 ZNF419Q96HQ0 510 aaPredicted RBP19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 FTHL17Q9BXU8 183 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 CASS4Q9NQ75 786 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 SAR1AQ9NR31 198 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 ZNF358Q9NW07 568 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 RAD54BQ9Y620 910 aa19.1■□□□□ 0.65
PDLIM4-201ENST00000253754 ZCWPW2A0A1B0GU75 182 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 ARHGAP42A6NI28 874 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 GOLGA8TH3BQL2 631 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 FCHO1O14526 889 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 DNAJC6O75061 913 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 SNNO75324 88 aaPredicted RBP19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 FAM189BP81408 668 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 CLLU1OSQ5K130 101 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 SPANXN3Q5MJ09 141 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 WLSQ5T9L3 541 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 TRIM42Q8IWZ5 723 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 LRRC40Q9H9A6 602 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 CHRAC1Q9NRG0 131 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 BFARQ9NZS9 450 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 TXNDC16Q9P2K2 825 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 BPTFQ12830 3046 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 PITPNM1O00562 1244 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 ITM2AO43736 263 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 GM2AP17900 193 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 PTPN4P29074 926 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 SERPINB6P35237 376 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 AQP5P55064 265 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 DCLRE1AQ6PJP8 1040 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 SLC39A5Q6ZMH5 540 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 CNTD1Q8N815 330 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 DPF3Q92784 378 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 SCLYQ96I15 445 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 LNPEPQ9UIQ6 1025 aa19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 HBS1LQ9Y450 684 aaKnown RBP19.09■□□□□ 0.65
PDLIM4-201ENST00000253754 LAMA3Q16787 3333 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 SCN5AQ14524 2016 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 TRAFD1O14545 582 aaPredicted RBP19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 PLIN3O60664 434 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 IGLV3-25P01717 112 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 GRIK1P39086 918 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 GP5P40197 560 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 MNX1P50219 401 aaPredicted RBP19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 STX3Q13277 289 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 ANKRD20A4Q4UJ75 823 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 HSP90AA5PQ58FG0 334 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 SDHAF4Q5VUM1 108 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 MBLAC2Q68D91 279 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 KYAT3Q6YP21 454 aaKnown RBP19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 ATG14Q6ZNE5 492 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 STRA8Q7Z7C7 330 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 ZNF280BQ86YH2 543 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 SPATA22Q8NHS9 363 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 CASP10Q92851 521 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 TEKT5Q96M29 485 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 CAB39LQ9H9S4 337 aa19.08■□□□□ 0.65
PDLIM4-201ENST00000253754 NUP205Q92621 2012 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 BIRC5O15392 142 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 GLRA3O75311 464 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 TYK2P29597 1187 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 RASSF2P50749 326 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 CCL23P55773 120 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 TMEM135Q86UB9 458 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms