RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 IQSEC1Q6DN90 963 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 IZUMO2Q6UXV1 221 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 OTOP3Q7RTS5 596 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 SLC2A13Q96QE2 648 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 CPNE1Q99829 537 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 LRRC40Q9H9A6 602 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 COG4Q9H9E3 785 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 BFARQ9NZS9 450 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 MBLAC1A4D2B0 266 aaPredicted RBP26.1■■□□□ 1.77
RAB40C-201ENST00000248139 AP2A1O95782 977 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 JCHAINP01591 159 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 SKIP12755 728 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 AVPR1AP37288 418 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 TRMT5Q32P41 509 aaKnown RBP26.1■■□□□ 1.77
RAB40C-201ENST00000248139 SPANXN3Q5MJ09 141 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 TCHHL1Q5QJ38 904 aaPredicted RBP26.1■■□□□ 1.77
RAB40C-201ENST00000248139 SENP8Q96LD8 212 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 FLRT1Q9NZU1 646 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 ZBTB14O43829 449 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 CHRNGP07510 517 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 NMBRP28336 390 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 GLRBP48167 497 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 STXBP5Q5T5C0 1151 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 C6orf163Q5TEZ5 329 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 RNF220Q5VTB9 566 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 FRMD7Q6ZUT3 714 aa26.1■■□□□ 1.77
RAB40C-201ENST00000248139 NEMP1O14524 444 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 COPAP53621 1224 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 DAOAP59103 153 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 GRTP1Q5TC63 336 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 ZNF467Q7Z7K2 595 aaPredicted RBP26.09■■□□□ 1.77
RAB40C-201ENST00000248139 TLK2Q86UE8 772 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 CCNJLQ8IV13 435 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 SPATA6LQ8N4H0 392 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 C3orf58Q8NDZ4 430 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 ZNF184Q99676 751 aaPredicted RBP26.09■■□□□ 1.77
RAB40C-201ENST00000248139 SLC39A10Q9ULF5 831 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 HSPA4LO95757 839 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 C2P06681 752 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 MRPS35P82673 323 aaKnown RBP26.09■■□□□ 1.77
RAB40C-201ENST00000248139 EML3Q32P44 896 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 RNF111Q6ZNA4 994 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 ARHGAP36Q6ZRI8 547 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 RAPH1Q70E73 1250 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 SPATA22Q8NHS9 363 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 OR52B2Q96RD2 323 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 NAT9Q9BTE0 207 aa26.09■■□□□ 1.77
RAB40C-201ENST00000248139 WDR55Q9H6Y2 383 aaPredicted RBP26.09■■□□□ 1.77
RAB40C-201ENST00000248139 F8W8V4 182 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 G3V2L1 256 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 PHGDHO43175 533 aaKnown RBP26.08■■□□□ 1.77
RAB40C-201ENST00000248139 SRGAP2BP0DMP2 458 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 MX2P20592 715 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 SP100P23497 879 aaPredicted RBP26.08■■□□□ 1.77
RAB40C-201ENST00000248139 GARSP41250 739 aaKnown RBP26.08■■□□□ 1.77
RAB40C-201ENST00000248139 CLCNKBP51801 687 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 LIMK2P53671 638 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 XKR4Q5GH76 650 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 KDELC2Q7Z4H8 507 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 HPS6Q86YV9 775 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 SLC26A7Q8TE54 656 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 GAD1Q99259 594 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 MIOSQ9NXC5 875 aa26.08■■□□□ 1.77
RAB40C-201ENST00000248139 TK2O00142 265 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 XPOTO43592 962 aaKnown RBP26.08■■□□□ 1.76
RAB40C-201ENST00000248139 SPRP35270 261 aaPredicted RBP26.08■■□□□ 1.76
RAB40C-201ENST00000248139 CDK18Q07002 472 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 CUL3Q13618 768 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 PLEKHH3Q7Z736 793 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 TMEM135Q86UB9 458 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 DEFB107AQ8IZN7 70 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 TOP6BLQ8N6T0 577 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 URGCPQ8TCY9 931 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 TKTL2Q9H0I9 626 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 NDE1Q9NXR1 346 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 CLEC11AQ9Y240 323 aa26.08■■□□□ 1.76
RAB40C-201ENST00000248139 YBX3P16989 372 aaKnown RBP eCLIP26.07■■□□□ 1.76
RAB40C-201ENST00000248139 ZNF460Q14592 562 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 CCL14Q16627 93 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 KCNMB4Q86W47 210 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 APBA2Q99767 749 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 SIK2Q9H0K1 926 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 PIDD1Q9HB75 910 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 FBXW11Q9UKB1 542 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 ANGPTL2Q9UKU9 493 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 ZCCHC18P0CG32 403 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 CYP2B6P20813 491 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 GRK2P25098 689 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 CMPK2Q5EBM0 449 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 FAM35AQ86V20 835 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 PTPN18Q99952 460 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 TSPYL2Q9H2G4 693 aaPredicted RBP26.07■■□□□ 1.76
RAB40C-201ENST00000248139 OR12D3Q9UGF7 316 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 CPA4Q9UI42 421 aa26.07■■□□□ 1.76
RAB40C-201ENST00000248139 KLHL2O95198 593 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 PSEN2P49810 448 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 AP2B1P63010 937 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 ADAM17P78536 824 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 SEMA3BQ13214 749 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 CFAP157Q5JU67 520 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms