RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 RBP1P09455 135 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 RPA3P35244 121 aaPredicted RBP13.42□□□□□ -0.26
NEK9-201ENST00000238616 PYDC2Q56P42 97 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 FAM126BQ8IXS8 530 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 RORBQ92753 470 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 SMARCD1Q96GM5 515 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 RASSF1Q9NS23 344 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 NUDT5Q9UKK9 219 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 TRAV19A0A0A6YYK7 116 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 MED26O95402 600 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 IL1R1P14778 569 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 NAMPTP43490 491 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 PSMD7P51665 324 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 AP1S2P56377 157 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 SYT12Q8IV01 421 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 NEDD1Q8NHV4 660 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 PPP1R13LQ8WUF5 828 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 TMEM176AQ96HP8 235 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 RUSC1Q9BVN2 902 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 ZNF780BQ9Y6R6 833 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 KANSL1LA0AUZ9 987 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 MPOP05164 745 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 CHRNGP07510 517 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 NRF1Q16656 503 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 PPP1R26Q5T8A7 1209 aaPredicted RBP13.42□□□□□ -0.26
NEK9-201ENST00000238616 EFCAB3Q8N7B9 438 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
NEK9-201ENST00000238616 BGNP21810 368 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 OMPP47874 163 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 RAD23AP54725 363 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 TAS2R41P59536 307 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 BOLA3Q53S33 107 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 BPIFA1Q9NP55 256 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 CLEC4AQ9UMR7 237 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 RGS14O43566 566 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 DPEP1P16444 411 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 ZNF7P17097 686 aaPredicted RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 ZFP14Q9HCL3 533 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 NDUFAF1Q9Y375 327 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 SRGNP10124 158 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 TGFBR2P37173 567 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 SOX10P56693 466 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 LIN54Q6MZP7 749 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 KNL1Q8NG31 2342 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 UBDO15205 165 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 SCN2BO60939 215 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 MICAL2O94851 1124 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 KCNH1O95259 989 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 CYP11B1P15538 503 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 PFKFB4Q16877 469 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 FAR1Q8WVX9 515 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 DHRS1Q96LJ7 313 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 FDXACB1Q9BRP7 624 aaPredicted RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 DCUN1D5Q9BTE7 237 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 PON1P27169 355 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 IDH2P48735 452 aaKnown RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 NT5C2P49902 561 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 SEC24CP53992 1094 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 SMCO1Q147U7 214 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 AGBL2Q5U5Z8 902 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 METTL21CQ5VZV1 264 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 RAP1GAP2Q684P5 730 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 STK32CQ86UX6 486 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 RNF148Q8N7C7 305 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 ABCG8Q9H221 673 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 AGPAT3Q9NRZ7 376 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 CISHQ9NSE2 258 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 CMTM6Q9NX76 183 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 OPTCQ9UBM4 332 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 TRIM66O15016 1216 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 DCLK1O15075 740 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 OGTO15294 1046 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 ERCC2P18074 760 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 HSPA14Q0VDF9 509 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 NR1I3Q14994 352 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 TAB1Q15750 504 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 MPPE1Q53F39 396 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 FBXO47Q5MNV8 452 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 MB21D2Q8IYB1 491 aaPredicted RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 RXFP2Q8WXD0 754 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 LRCH1Q9Y2L9 728 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 GPC6Q9Y625 555 aaPredicted RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 RTN3O95197 1032 aaPredicted RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 ACADLP28330 430 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.41□□□□□ -0.26
NEK9-201ENST00000238616 EIF3MQ7L2H7 374 aaKnown RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 WDR60Q8WVS4 1066 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 CD248Q9HCU0 757 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 INTS7Q9NVH2 962 aaKnown RBP13.41□□□□□ -0.26
NEK9-201ENST00000238616 GSTK1Q9Y2Q3 226 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 PCDHB5Q9Y5E4 795 aa13.41□□□□□ -0.26
NEK9-201ENST00000238616 TRIM64BA6NI03 449 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 EQTNQ9NQ60 294 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 TET3O43151 1660 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms