RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 NMRAL1Q9HBL8 299 aa19.12■□□□□ 0.65
CPSF3-201ENST00000238112 POMPQ9Y244 141 aa19.12■□□□□ 0.65
CPSF3-201ENST00000238112 NRCAMQ92823 1304 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 ERI2A8K979 691 aaKnown RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 TRIM13O60858 407 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 SORBS2O94875 1100 aaKnown RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 KCNE1P15382 129 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 PTPN1P18031 435 aaKnown RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 ABCG1P45844 678 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 AIF1P55008 147 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 LILRA4P59901 499 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 MPP3Q13368 585 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 DLG2Q15700 870 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 LRRC36Q1X8D7 754 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 SLC9B1Q4ZJI4 515 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 CLEC20AQ6ZU45 233 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 KCNMB4Q86W47 210 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 PDSS2Q86YH6 399 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 FBXW8Q8N3Y1 598 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 HIPK4Q8NE63 616 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 ADAM32Q8TC27 787 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 PPP1R13LQ8WUF5 828 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 MFSD3Q96ES6 412 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 DDX50Q9BQ39 737 aaKnown RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 FAM192AQ9GZU8 254 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 RNF39Q9H2S5 420 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 C20orf96Q9NUD7 363 aaPredicted RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 KIF3CO14782 793 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 ZBTB24O43167 697 aaPredicted RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 ZMPSTE24O75844 475 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 CYP2C9P11712 490 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 PAPOLAP51003 745 aaKnown RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 MAP3K7CLP57077 242 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 PPIDQ08752 370 aaKnown RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 KLF10Q13118 480 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 TCHHL1Q5QJ38 904 aaPredicted RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 METTL21CQ5VZV1 264 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
CPSF3-201ENST00000238112 CLEC14AQ86T13 490 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 HPS6Q86YV9 775 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 AGR3Q8TD06 166 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 KLHL4Q9C0H6 718 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 GBA3Q9H227 469 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 EBF3Q9H4W6 596 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 PIDD1Q9HB75 910 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 MID2Q9UJV3 735 aa19.11■□□□□ 0.65
CPSF3-201ENST00000238112 MAGEB16A2A368 324 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 MTSS1O43312 755 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 ZBTB14O43829 449 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 C2P06681 752 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 SMIM10L2AP0DMW4 78 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 SMIM10L2BP0DMW5 78 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 CSE1LP55060 971 aaKnown RBP19.1■□□□□ 0.65
CPSF3-201ENST00000238112 HNRNPDQ14103 355 aaKnown RBP19.1■□□□□ 0.65
CPSF3-201ENST00000238112 CERCAMQ5T4B2 595 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 ITPRIPL1Q6GPH6 555 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 DPP9Q86TI2 863 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 RNF169Q8NCN4 708 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 NTAN1Q96AB6 310 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 TUBGCP5Q96RT8 1024 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 TSPAN18Q96SJ8 248 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 KCNK16Q96T55 309 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 RTKNQ9BST9 563 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 TCF7L2Q9NQB0 619 aa19.1■□□□□ 0.65
CPSF3-201ENST00000238112 SMIM35A0A1B0GVV1 85 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 EME2A4GXA9 379 aaPredicted RBP19.09■□□□□ 0.65
CPSF3-201ENST00000238112 FAM200BP0CF97 657 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 CYP2B6P20813 491 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 FOXB2Q5VYV0 432 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 PAQR9Q6ZVX9 377 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 GDPD5Q8WTR4 605 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 BRD8Q9H0E9 1235 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 IARS2Q9NSE4 1012 aaKnown RBP19.09■□□□□ 0.65
CPSF3-201ENST00000238112 ZDHHC7Q9NXF8 308 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 CPSF2Q9P2I0 782 aaKnown RBP19.09■□□□□ 0.65
CPSF3-201ENST00000238112 TRHDEQ9UKU6 1024 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 STRNO43815 780 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 NPY2RP49146 381 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 XKR4Q5GH76 650 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 LPCAT4Q643R3 524 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 KCTD11Q693B1 232 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 ACAD11Q709F0 780 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 VPS39Q96JC1 886 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 TSNARE1Q96NA8 513 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 APOL2Q9BQE5 337 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 ULBP1Q9BZM6 244 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 IL22Q9GZX6 179 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 ILKAPQ9H0C8 392 aaPredicted RBP19.09■□□□□ 0.65
CPSF3-201ENST00000238112 ADAMTS6Q9UKP5 1117 aa19.09■□□□□ 0.65
CPSF3-201ENST00000238112 NRP1O14786 923 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 FBXO21O94952 628 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 APOA4P06727 396 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 GJA5P36382 358 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 XIAPP98170 497 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 SCAPQ12770 1279 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 ARL13BQ3SXY8 428 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 WSCD1Q658N2 575 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 RNF111Q6ZNA4 994 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 NPWQ8N729 165 aa19.08■□□□□ 0.65
CPSF3-201ENST00000238112 EFCAB3Q8N7B9 438 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms