RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CDKL3Q8IVW4 592 aaPredicted RBP21.02■□□□□ 0.96
SNX3-201ENST00000230085 PHOSPHO2Q8TCD6 241 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 SLC9A7Q96T83 725 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 EBF4Q9BQW3 602 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 ZNF670Q9BS34 389 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 DCDC2Q9UHG0 476 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 CDH22Q9UJ99 828 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 H7C0C1 242 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 ZNF195O14628 629 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 AVILO75366 819 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 GJB5O95377 273 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 BAG2O95816 211 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 TNNC2P02585 160 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 STAG3L1P0CL83 205 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 TNFSF9P41273 254 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 ATP5OP48047 213 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 GATMP50440 423 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 UBAP2LQ14157 1087 aaKnown RBP21.01■□□□□ 0.95
SNX3-201ENST00000230085 USP41Q3LFD5 358 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 FASTKD1Q53R41 847 aaKnown RBP21.01■□□□□ 0.95
SNX3-201ENST00000230085 SFT2D3Q587I9 215 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 PRPF38BQ5VTL8 546 aaKnown RBP21.01■□□□□ 0.95
SNX3-201ENST00000230085 HERC6Q8IVU3 1022 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 B4GALNT2Q8NHY0 566 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 HSPH1Q92598 858 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 TJP2Q9UDY2 1190 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 VPS28Q9UK41 221 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 EMCNQ9ULC0 261 aa21.01■□□□□ 0.95
SNX3-201ENST00000230085 APOL1O14791 398 aa21■□□□□ 0.95
SNX3-201ENST00000230085 MDM4O15151 490 aa21■□□□□ 0.95
SNX3-201ENST00000230085 PLIN3O60664 434 aa21■□□□□ 0.95
SNX3-201ENST00000230085 IL18RAPO95256 599 aa21■□□□□ 0.95
SNX3-201ENST00000230085 ZBED1O96006 694 aa21■□□□□ 0.95
SNX3-201ENST00000230085 GRM5P41594 1212 aa21■□□□□ 0.95
SNX3-201ENST00000230085 GPD2P43304 727 aa21■□□□□ 0.95
SNX3-201ENST00000230085 AFF1P51825 1210 aaKnown RBP21■□□□□ 0.95
SNX3-201ENST00000230085 MTTPP55157 894 aa21■□□□□ 0.95
SNX3-201ENST00000230085 NIPAL4Q0D2K0 466 aa21■□□□□ 0.95
SNX3-201ENST00000230085 SEMA5AQ13591 1074 aa21■□□□□ 0.95
SNX3-201ENST00000230085 TAF5Q15542 800 aa21■□□□□ 0.95
SNX3-201ENST00000230085 FAXCQ5TGI0 409 aa21■□□□□ 0.95
SNX3-201ENST00000230085 TTC39CQ8N584 583 aa21■□□□□ 0.95
SNX3-201ENST00000230085 PQLC3Q8N755 202 aa21■□□□□ 0.95
SNX3-201ENST00000230085 EMC1Q8N766 993 aa21■□□□□ 0.95
SNX3-201ENST00000230085 LZICQ8WZA0 190 aa21■□□□□ 0.95
SNX3-201ENST00000230085 ISL2Q96A47 359 aa21■□□□□ 0.95
SNX3-201ENST00000230085 PGBD4Q96DM1 585 aa21■□□□□ 0.95
SNX3-201ENST00000230085 KCNK16Q96T55 309 aa21■□□□□ 0.95
SNX3-201ENST00000230085 DDX50Q9BQ39 737 aaKnown RBP21■□□□□ 0.95
SNX3-201ENST00000230085 PRDM16Q9HAZ2 1276 aa21■□□□□ 0.95
SNX3-201ENST00000230085 STAU2Q9NUL3 570 aaKnown RBP eCLIP21■□□□□ 0.95
SNX3-201ENST00000230085 RNF19AQ9NV58 838 aa21■□□□□ 0.95
SNX3-201ENST00000230085 KLK14Q9P0G3 267 aa21■□□□□ 0.95
SNX3-201ENST00000230085 PCSK1NQ9UHG2 260 aa21■□□□□ 0.95
SNX3-201ENST00000230085 SLC22A2O15244 555 aa21■□□□□ 0.95
SNX3-201ENST00000230085 KCNN4O15554 427 aa21■□□□□ 0.95
SNX3-201ENST00000230085 CREB3O43889 395 aa21■□□□□ 0.95
SNX3-201ENST00000230085 DGKIO75912 1065 aa21■□□□□ 0.95
SNX3-201ENST00000230085 USP1O94782 785 aa21■□□□□ 0.95
SNX3-201ENST00000230085 SLC1A6P48664 564 aa21■□□□□ 0.95
SNX3-201ENST00000230085 RABGGTBP53611 331 aa21■□□□□ 0.95
SNX3-201ENST00000230085 ZNF394Q53GI3 561 aa21■□□□□ 0.95
SNX3-201ENST00000230085 CLLU1OSQ5K130 101 aa21■□□□□ 0.95
SNX3-201ENST00000230085 NPNTQ6UXI9 565 aa21■□□□□ 0.95
SNX3-201ENST00000230085 TRAF3IP1Q8TDR0 691 aaPredicted RBP21■□□□□ 0.95
SNX3-201ENST00000230085 DGCR14Q96DF8 476 aaKnown RBP21■□□□□ 0.95
SNX3-201ENST00000230085 ANKRD36BP1Q96IX9 119 aa21■□□□□ 0.95
SNX3-201ENST00000230085 ZBED2Q9BTP6 218 aa21■□□□□ 0.95
SNX3-201ENST00000230085 SLC13A1Q9BZW2 595 aa21■□□□□ 0.95
SNX3-201ENST00000230085 CXCL16Q9H2A7 254 aa21■□□□□ 0.95
SNX3-201ENST00000230085 ADAMTS6Q9UKP5 1117 aa21■□□□□ 0.95
SNX3-201ENST00000230085 KIAA1257Q9ULG3 409 aa21■□□□□ 0.95
SNX3-201ENST00000230085 PRPF19Q9UMS4 504 aaKnown RBP21■□□□□ 0.95
SNX3-201ENST00000230085 POMPQ9Y244 141 aa21■□□□□ 0.95
SNX3-201ENST00000230085 TRIP11Q15643 1979 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 H3BNX3 289 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 CILPO75339 1184 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 RECQL4O94761 1208 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 ATICP31939 592 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 NR2C2P49116 596 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 MMRN1Q13201 1228 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 MAP7Q14244 749 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 LRRC23Q53EV4 343 aaPredicted RBP20.99■□□□□ 0.95
SNX3-201ENST00000230085 BORAQ6PGQ7 559 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 FBXW8Q8N3Y1 598 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 GDPD5Q8WTR4 605 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 ATP2A3Q93084 1043 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 ZFP42Q96MM3 310 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 NAT9Q9BTE0 207 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 ZNF395Q9H8N7 513 aaPredicted RBP20.99■□□□□ 0.95
SNX3-201ENST00000230085 EIF2B3Q9NR50 452 aaKnown RBP20.99■□□□□ 0.95
SNX3-201ENST00000230085 CIDEBQ9UHD4 219 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 DNAJC16Q9Y2G8 782 aa20.99■□□□□ 0.95
SNX3-201ENST00000230085 PRPSAP2O60256 369 aa20.98■□□□□ 0.95
SNX3-201ENST00000230085 VDRP11473 427 aa20.98■□□□□ 0.95
SNX3-201ENST00000230085 CD19P15391 556 aa20.98■□□□□ 0.95
SNX3-201ENST00000230085 MLH1P40692 756 aa20.98■□□□□ 0.95
SNX3-201ENST00000230085 IDH3AP50213 366 aa20.98■□□□□ 0.95
SNX3-201ENST00000230085 BCAR1P56945 870 aa20.98■□□□□ 0.95
SNX3-201ENST00000230085 PDK3Q15120 406 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms