RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 EPHB2P29323 1055 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 GARSP41250 739 aaKnown RBP13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CTC1Q2NKJ3 1217 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 FAXCQ5TGI0 409 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 STEAP4Q687X5 459 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 NPAS4Q8IUM7 802 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 LRRC49Q8IUZ0 686 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 ZNF567Q8N184 647 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CRIPAKQ8N1N5 446 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 AGGF1Q8N302 714 aaeCLIP13.44□□□□□ -0.26
COPS7A-201ENST00000229251 SCAMP5Q8TAC9 235 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 SPPL2BQ8TCT7 592 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 RNF34Q969K3 372 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 GRAMD1AQ96CP6 724 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 MTBPQ96DY7 904 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 SEC16BQ96JE7 1060 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 YME1L1Q96TA2 773 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 PLCD4Q9BRC7 762 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 LMAN2LQ9H0V9 348 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 RABEP2Q9H5N1 569 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CATSPERBQ9H7T0 1116 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 ABI2Q9NYB9 513 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-201ENST00000229251 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 LRFN2Q9ULH4 789 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 PRG3Q9Y2Y8 225 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-201ENST00000229251 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 SDR42E2A6NKP2 422 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 H7C4K7 107 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 KRT37O76014 449 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 SUN1O94901 812 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 RTN3O95197 1032 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CNTFP26441 200 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 IFNAR2P48551 515 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CORO7P57737 925 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 IFRD2Q12894 506 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-201ENST00000229251 MPP2Q14168 576 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 KBTBD12Q3ZCT8 623 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CTXN3Q4LDR2 81 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 MANEALQ5VSG8 457 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 ERMP1Q7Z2K6 904 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 ANKRD42Q8N9B4 389 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CCDC197Q8NCU1 140 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CABS1Q96KC9 395 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 TSGA13Q96PP4 275 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 CLIC5Q9NZA1 410 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 TLR6Q9Y2C9 796 aa13.44□□□□□ -0.26
COPS7A-201ENST00000229251 USP34Q70CQ2 3546 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 GOLGA6L7A0A1B0GV03 622 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 AVILO75366 819 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 ALDH1A2O94788 518 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
COPS7A-201ENST00000229251 CA4P22748 312 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 PTPN3P26045 913 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 SERPINB9P50453 376 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 GPR17Q13304 367 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 FRG1Q14331 258 aaKnown RBP13.43□□□□□ -0.26
COPS7A-201ENST00000229251 QPCTQ16769 361 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 TTC39BQ5VTQ0 682 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-201ENST00000229251 UNC5AQ6ZN44 842 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 SCD5Q86SK9 330 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 KLHDC8BQ8IXV7 354 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 LRRC34Q8IZ02 419 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 LRRC43Q8N309 656 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 NPWQ8N729 165 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 TTC17Q96AE7 1141 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 STAMBPL1Q96FJ0 436 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 C1orf74Q96LT6 269 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 GBA3Q9H227 469 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 OLA1Q9NTK5 396 aaKnown RBP13.43□□□□□ -0.26
COPS7A-201ENST00000229251 FAM86C1Q9NVL1 165 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 KLHL8Q9P2G9 620 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-201ENST00000229251 NEU3Q9UQ49 428 aa13.43□□□□□ -0.26
COPS7A-201ENST00000229251 CFAP54Q96N23 3096 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 FAM159BA6NKW6 160 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 PSMD3O43242 534 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 KRT38O76015 456 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 AP2A1O95782 977 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 PGAM1P18669 254 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 KRT4P19013 534 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 ZXDAP98168 799 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 EFTUD2Q15029 972 aaKnown RBP eCLIP13.42□□□□□ -0.262e-8■■■■■ 57.6
COPS7A-201ENST00000229251 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 ARMC3Q5W041 872 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 ANKS3Q6ZW76 656 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 SCN4BQ8IWT1 228 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 ATOH1Q92858 354 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-201ENST00000229251 TBC1D31Q96DN5 1066 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 CFAP36Q96G28 342 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 MARCH5Q9NX47 278 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 MKS1Q9NXB0 559 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 MOCS1Q9NZB8 636 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 CD207Q9UJ71 328 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 ZFHX2Q9C0A1 2572 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-201ENST00000229251 WASH4PA8MWX3 477 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 TBC1D4O60343 1298 aa13.42□□□□□ -0.26
COPS7A-201ENST00000229251 SNX3O60493 162 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms