RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 PGFP49763 221 aa12□□□□□ -0.49
TNFAIP1-201ENST00000226225 ROR2Q01974 943 aaKnown RBP12□□□□□ -0.49
TNFAIP1-201ENST00000226225 HEATR6Q6AI08 1181 aaKnown RBP12□□□□□ -0.49
TNFAIP1-201ENST00000226225 TFAP2DQ7Z6R9 452 aa12□□□□□ -0.49
TNFAIP1-201ENST00000226225 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12□□□□□ -0.49
TNFAIP1-201ENST00000226225 CMASQ8NFW8 434 aaPredicted RBP12□□□□□ -0.49
TNFAIP1-201ENST00000226225 FUBP3Q96I24 572 aaKnown RBP eCLIP12□□□□□ -0.49
TNFAIP1-201ENST00000226225 TRIM62Q9BVG3 475 aa12□□□□□ -0.49
TNFAIP1-201ENST00000226225 CRISPLD1Q9H336 500 aa12□□□□□ -0.49
TNFAIP1-201ENST00000226225 MARCH2Q9P0N8 246 aa12□□□□□ -0.49
TNFAIP1-201ENST00000226225 WHRNQ9P202 907 aa12□□□□□ -0.49
TNFAIP1-201ENST00000226225 TTC3P53804 2025 aa12□□□□□ -0.49
TNFAIP1-201ENST00000226225 LIASO43766 372 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 TLR5O60602 858 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 GJB5O95377 273 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 SSTR1P30872 391 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 PDIA2Q13087 525 aaKnown RBP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 TNFAIP8L3Q5GJ75 292 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 CASP10Q92851 521 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 KCTD15Q96SI1 283 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 SHCBP1LQ9BZQ2 653 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 LRRC19Q9H756 370 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 DCLRE1BQ9H816 532 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 VANGL2Q9ULK5 521 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 STK10O94804 968 aaKnown RBP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 SOD2P04179 222 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 ENO1P06733 434 aaKnown RBP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 VCPP55072 806 aaKnown RBP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 ZNF697Q5TEC3 545 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 C1orf53Q5VUE5 145 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 LRRC74BQ6ZQY2 392 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 BBS12Q6ZW61 710 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 COLGALT1Q8NBJ5 622 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 DEPDC1BQ8WUY9 529 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 ZNF75CPQ92670 426 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 CSPG4P5Q96PW8 444 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 NPY6RQ99463 290 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 PCMTD2Q9NV79 361 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 SLC17A7Q9P2U7 560 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 MFHAS1Q9Y4C4 1052 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 APOC4-APOC2K7ER74 178 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 KCNK1O00180 336 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 MAP3K7O43318 606 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 ASMTLO95671 621 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 APOC2P02655 101 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 TROVE2P10155 538 aaKnown RBP eCLIP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 PPM1AP35813 382 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 TBX4P57082 545 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 IRX4P78413 519 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 PDZD4Q76G19 769 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 CLNKQ7Z7G1 428 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 USP33Q8TEY7 942 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 FAF2Q96CS3 445 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 TCF25Q9BQ70 676 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 OCEL1Q9H607 264 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 CWH43Q9H720 699 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 RAB6BQ9NRW1 208 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 ETNK2Q9NVF9 386 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 SIP14410 1827 aa11.99□□□□□ -0.49
TNFAIP1-201ENST00000226225 LAMA3Q16787 3333 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 EDF1O60869 148 aaKnown RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 RTN3O95197 1032 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 LRG1P02750 347 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 RBL1P28749 1068 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 PTPN4P29074 926 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 L1CAMP32004 1257 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 TWF1Q12792 350 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 RINLQ6ZS11 566 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 TRABD2AQ86V40 505 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 UNC45BQ8IWX7 931 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 PLD5Q8N7P1 536 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 ZNF461Q8TAF7 563 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 CCDC110Q8TBZ0 833 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 EZH1Q92800 747 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 GRAMD1AQ96CP6 724 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 AGAP3Q96P47 875 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 LGMNQ99538 433 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 CCSER2Q9H7U1 834 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 TRPM5Q9NZQ8 1165 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 MPP6Q9NZW5 540 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 FYNP06241 537 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 APRTP07741 180 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 MYOGP15173 224 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 IVDP26440 423 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 FAM72CH0Y354 149 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 DPYSL4O14531 572 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 TRDMT1O14717 391 aaKnown RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 ERCC2P18074 760 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 PGM1P36871 562 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 EPHB3P54753 998 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 ITKQ08881 620 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 CUL3Q13618 768 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 BBS9Q3SYG4 887 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 FAM72AQ5TYM5 149 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 FAM72DQ6L9T8 149 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 PSRC1Q6PGN9 363 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 IZUMO2Q6UXV1 221 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms