RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 AMPD1P23109 780 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 IL4RP24394 825 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 HOXD9P28356 352 aaPredicted RBP16.86■□□□□ 0.29
LIM2-201ENST00000221973 ZNF135P52742 658 aaPredicted RBP16.86■□□□□ 0.29
LIM2-201ENST00000221973 LMNB2Q03252 620 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 ZNF211Q13398 564 aaPredicted RBP16.86■□□□□ 0.29
LIM2-201ENST00000221973 SIM2Q14190 667 aaPredicted RBP16.86■□□□□ 0.29
LIM2-201ENST00000221973 LLGL1Q15334 1064 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 TTC39BQ5VTQ0 682 aaPredicted RBP16.86■□□□□ 0.29
LIM2-201ENST00000221973 MFSD7Q6UXD7 560 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 SPOCD1Q6ZMY3 1216 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 ANKS1BQ7Z6G8 1248 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 CARNMT1Q8N4J0 409 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 UBE2Q2Q8WVN8 375 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 RBM41Q96IZ5 413 aaKnown RBP16.86■□□□□ 0.29
LIM2-201ENST00000221973 PSMB7Q99436 277 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 ZNF670Q9BS34 389 aa16.86■□□□□ 0.29
LIM2-201ENST00000221973 POLR3BQ9NW08 1133 aaPredicted RBP16.86■□□□□ 0.29
LIM2-201ENST00000221973 ATG2BQ96BY7 2078 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 A0A1B0GVM2 712 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 TCAF2A6NFQ2 919 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 PRR5-ARHGAP8B1AHC4 643 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 KCNK3O14649 394 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 ATP1A1P05023 1023 aaKnown RBP16.85■□□□□ 0.29
LIM2-201ENST00000221973 PYGMP11217 842 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 RHOQP17081 205 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 ERCC2P18074 760 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 HTR7P34969 479 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 CNR2P34972 360 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 GJA4P35212 333 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 HCAR3P49019 387 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 CDH4P55283 916 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 ARHGAP8P85298 464 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 DPYSQ14117 519 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 GAB4Q2WGN9 574 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 ANKRD20A8PQ5CZ79 823 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 MPP7Q5T2T1 576 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 DCAF12L1Q5VU92 463 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 AADACL2Q6P093 401 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 CHST9Q7L1S5 443 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 WDR5BQ86VZ2 330 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 EZH1Q92800 747 aaPredicted RBP16.85■□□□□ 0.29
LIM2-201ENST00000221973 C16orf45Q96MC5 204 aaPredicted RBP16.85■□□□□ 0.29
LIM2-201ENST00000221973 MAK16Q9BXY0 300 aaKnown RBP16.85■□□□□ 0.29
LIM2-201ENST00000221973 CATSPERBQ9H7T0 1116 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 ARHGEF4Q9NR80 690 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 RCOR3Q9P2K3 495 aaPredicted RBP16.85■□□□□ 0.29
LIM2-201ENST00000221973 RAB23Q9ULC3 237 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 CLEC4EQ9ULY5 219 aa16.85■□□□□ 0.29
LIM2-201ENST00000221973 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.85■□□□□ 0.29
LIM2-201ENST00000221973 SDK1Q7Z5N4 2213 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.84■□□□□ 0.29
LIM2-201ENST00000221973 H0Y626 953 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 FGF10O15520 208 aaPredicted RBP16.84■□□□□ 0.29
LIM2-201ENST00000221973 CLDN11O75508 207 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 LUC7L3O95232 432 aaKnown RBP16.84■□□□□ 0.29
LIM2-201ENST00000221973 EGFP01133 1207 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 KRT10P13645 584 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 CXCR5P32302 372 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 CDKN2BP42772 138 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 ETF1P62495 437 aaKnown RBP16.84■□□□□ 0.29
LIM2-201ENST00000221973 ZNF177Q13360 481 aaPredicted RBP16.84■□□□□ 0.29
LIM2-201ENST00000221973 CDH18Q13634 790 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 KAZNQ674X7 775 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 SYT10Q6XYQ8 523 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 NYAP1Q6ZVC0 841 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 NLRP14Q86W24 1093 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 C12orf40Q86WS4 652 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 RFX6Q8HWS3 928 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 MFN1Q8IWA4 741 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
LIM2-201ENST00000221973 PCDH19Q8TAB3 1148 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 WFDC5Q8TCV5 224 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 FAF2Q96CS3 445 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 RNF157Q96PX1 679 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
LIM2-201ENST00000221973 DNAI1Q9UI46 699 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 MFHAS1Q9Y4C4 1052 aa16.84■□□□□ 0.29
LIM2-201ENST00000221973 CACNG3O60359 315 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 LRP3O75074 770 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 SDHBP21912 280 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 OR1E1P30953 314 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 CETN2P41208 172 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 SLC6A11P48066 632 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 PXNP49023 591 aaPredicted RBP16.83■□□□□ 0.28
LIM2-201ENST00000221973 GALK1P51570 392 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 EML5Q05BV3 1969 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 TFDP3Q5H9I0 405 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 FSCBQ5H9T9 825 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 FAM160A2Q8N612 972 aaPredicted RBP16.83■□□□□ 0.28
LIM2-201ENST00000221973 RTL3Q8N8U3 475 aaKnown RBP16.83■□□□□ 0.28
LIM2-201ENST00000221973 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.83■□□□□ 0.28
LIM2-201ENST00000221973 NAPGQ99747 312 aaPredicted RBP16.83■□□□□ 0.28
LIM2-201ENST00000221973 HEMGNQ9BXL5 484 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 SEMA4GQ9NTN9 838 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 NDFIP2Q9NV92 336 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 ETNK2Q9NVF9 386 aa16.83■□□□□ 0.28
LIM2-201ENST00000221973 DNAJC17Q9NVM6 304 aaKnown RBP16.83■□□□□ 0.28
LIM2-201ENST00000221973 TMEM248Q9NWD8 314 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms