RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Atg14Q8CDJ3 492 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 HnrnplQ8R081 586 aaKnown RBP16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Brd8Q8R3B7 951 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Sh3kbp1Q8R550 709 aaKnown RBP16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Asz1Q8VD46 475 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Chn1Q91V57 459 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Fam3cQ91VU0 227 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 March2Q99M02 246 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Tsga13Q9DA17 273 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Sertad3Q9ERC3 197 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Tdrd6P61407 2134 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Col9a3A2ACT7 680 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Slc35g2D3YVE8 412 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mroh9G5E8L9 891 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 ComtO88587 265 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Gna12P27600 379 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 St14P56677 855 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Ddr1Q03146 911 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Nhej1Q3KNJ2 295 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Prdm6Q3UZD5 596 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Pde1aQ61481 565 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Naaladl1Q7M758 745 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 SyncripQ7TMK9 623 aaKnown RBP16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Nrde2Q80XC6 1172 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 H2-M10.2Q85ZW9 329 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Gm6377Q8BHV4 303 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Daam1Q8BPM0 1077 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mei4Q8BRM6 389 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Enpp4Q8BTJ4 456 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Trub1Q8C0D0 338 aaKnown RBP16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Wdr59Q8C0M0 992 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Pnma3Q8JZW8 466 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Glcci1Q8K3I9 537 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Atpaf2Q91YY4 289 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mgrn1Q9D074 532 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Jph3Q9ET77 744 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 EefsecQ9JHW4 583 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Chrna6Q9R0W9 494 aa16.51■□□□□ 0.23
Tpm1-215ENSMUST00000113705 MgaA2AWL7 3003 aaKnown RBP16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Gm13271B1AYH9 182 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Gm42957D6RFQ2 366 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Sypl1O09117 261 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Nek2O35942 443 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Ap3d1O54774 1199 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Per2O54943 1257 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 HdcP23738 662 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Lefty2P57785 368 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Dab2ipQ3UHC7 1189 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Hs3st2Q673U1 367 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 SpopQ6ZWS8 374 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mvb12aQ78HU3 271 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Nup93Q8BJ71 819 aaKnown RBP16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mlc1Q8VHK5 382 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Xpo6Q924Z6 1125 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 LipfQ9CPP7 395 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mrps33Q9D2R8 106 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Caln1Q9JJG7 219 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Slc7a9Q9QXA6 487 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Atp11cQ9QZW0 1129 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mta2Q9R190 668 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Slc23a1Q9Z2J0 605 aa16.5■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Phox2bO35690 314 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Ltb4rO88855 351 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Soat2O88908 525 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mapkapk2P49138 386 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 9130409I23RikQ3TS87 320 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Trim21Q62191 470 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Tpgs2Q66JT5 296 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Wfikkn2Q7TQN3 571 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Prpf38bQ80SY5 542 aaKnown RBP16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Lrrc8aQ80WG5 810 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Asb14Q8C6Y6 587 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Trim12aQ99PQ1 284 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Mrfap1Q9CQL7 125 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Dph5Q9CWQ0 281 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Efhc2Q9D485 750 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Exoc2Q9D4H1 924 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Fam227bQ9D518 532 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Thap11Q9JJD0 305 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 HephQ9Z0Z4 1157 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Wdr90Q6ZPG2 1874 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Igkv6-29A0A0G2JEI6 115 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Olfr742A2RTP5 311 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 C7D3YXF5 845 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Ercc2O08811 760 aaKnown RBP16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 IghgP01863 330 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Hoxa9P09631 271 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Tap1P21958 724 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Arl4aP61213 200 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Ezh1P70351 747 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 IqcmQ149I8 489 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Slc38a5Q3U1J0 479 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Gpr174Q3U507 335 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Wdr41Q3UDP0 460 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Fam189bQ5HZJ5 669 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Ccdc42Q5SV66 316 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Fbxw2Q60584 422 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 HrQ61645 1182 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 OcrlQ6NVF0 900 aa16.49■□□□□ 0.23
Tpm1-215ENSMUST00000113705 Apol7cQ8C6E1 369 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms