RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Rrp36Q3UFY0 244 aaKnown RBP21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Grm5Q3UVX5 1203 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gcnt3Q5JCT0 437 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ccdc181Q80ZU5 509 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gtf3c4Q8BMQ2 817 aaKnown RBP21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Asz1Q8VD46 475 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 AjubaQ91XC0 547 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ovca2Q9D7E3 225 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Plscr2Q9DCW2 307 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 PtproE9Q612 1226 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Aff1O88573 1216 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tex11Q14AT2 947 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Aars2Q14CH7 980 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Prickle1Q3U5C7 832 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 McuQ3UMR5 350 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Parp6Q6P6P7 630 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tdpoz3Q717B4 365 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Xylt1Q811B1 953 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Lrrc4cQ8C031 640 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ppp6r2Q8R3Q2 923 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tspan33Q8R3S2 283 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Rprd1aQ8VDS4 312 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tfap2dQ91ZK0 452 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 March2Q99M02 246 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Marc1Q9CW42 340 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Asb1Q9WV74 336 aa21.68■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ankfn1A0A140LIW7 1083 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Patl2A2ARM1 529 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 4930444G20RikD3Z741 495 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ca3P16015 260 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 CenpcP49452 906 aaKnown RBP21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cav1P49817 178 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gpd1lQ3ULJ0 351 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Sp140Q6NSQ5 534 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ccdc40Q8BI79 1192 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 HpdlQ8K248 371 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 TfQ921I1 697 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gprc5bQ923Z0 410 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Adi1Q99JT9 179 aa21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Mrps17Q9CQE3 120 aaKnown RBP21.67■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Bfsp1A2AMT1 669 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Fam155bA2BDP1 471 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Hsf3D0VYS2 492 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Usp2O88623 613 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ndst2P52850 883 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Grb7Q03160 535 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ceacam5Q3UKK2 947 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Fzd6Q61089 709 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tas2r129Q7M709 320 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Glra2Q7TNC8 452 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Susd6Q8BGE4 302 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 L3mbtl3Q8BLB7 883 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Defb36Q8K3U4 67 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Spag16Q8K450 639 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ndufb5Q9CQH3 189 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Prl5a1Q9JII2 230 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Trpc7Q9WVC5 862 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Slfn2Q9Z0I6 378 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Numa1E9Q7G0 2094 aaKnown RBP21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 PtprdQ64487 1912 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Vwa5b1A9Z1V5 1215 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Vmn2r59E9PUT5 865 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Dthd1E9PZX1 795 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Zfp758E9QAA1 583 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 PigrO70570 771 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Folr1P35846 255 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Surf6P70279 355 aaKnown RBP21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Neurog1P70660 244 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Bdkrb1Q61125 334 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Igfbp7Q61581 281 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Rad54bQ6PFE3 886 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ddx18Q8K363 660 aaKnown RBP21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Olfr847Q8VFF4 312 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 MceeQ9D1I5 178 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Polr3hQ9D2C6 204 aaKnown RBP21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cwc15Q9JHS9 229 aaKnown RBP21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 MkksQ9JI70 570 aa21.66■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Coro1aO89053 461 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cd2P08920 344 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Il12bP43432 335 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Upp1P52624 311 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gabrr2P56476 465 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cdk16Q04735 496 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 B3gntl1Q3U129 357 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 HiraQ61666 1015 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 MafkQ61827 156 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cand1Q6ZQ38 1230 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 E330017A01RikQ8BU47 192 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ldlrap1Q8C142 308 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 NaprtQ8CC86 538 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Rwdd4Q9CPR1 188 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Alg14Q9D081 217 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tssk3Q9D2E1 268 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 PolhQ9JJN0 694 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Chrna6Q9R0W9 494 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Stk11Q9WTK7 436 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 KcpQ3U492 1550 aa21.65■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Kat6aQ8BZ21 2003 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 9230113P08RikD3YWX3 137 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Olfr414E9Q5P8 317 aa21.64■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms