RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 AmacrO09174 381 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 MutP16332 748 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Alox15P39654 663 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 MyrfQ3UR85 1138 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cln3Q61124 438 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Armcx2Q6A058 784 aaKnown RBP13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zfp943Q6NZP4 507 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pqlc1Q80XM9 271 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Smndc1Q8BGT7 238 aaKnown RBP13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mapkap1Q8BKH7 522 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc7a4Q8BLQ7 635 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc18a2Q8BRU6 517 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 MafaQ8CF90 359 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ipo11Q8K2V6 975 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pacsin3Q99JB8 424 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Krcc1Q99JT5 256 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Psmd12Q9D8W5 456 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 TcimQ9D915 106 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cab39lQ9DB16 337 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Serpina1fQ9DCQ7 411 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pi16Q9ET66 489 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 A0A1Y7VP24 259 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 A630010A05RikA9C473 232 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Vmn2r72D3Z4N8 856 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Olfr1354E9Q5G9 310 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zfp946F6VWU8 523 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Matn2O08746 956 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ercc2O08811 760 aaKnown RBP13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc2a7P0C6A1 513 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cyp2f2P33267 491 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc20a1Q61609 681 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Arl5cQ6P068 179 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ppm1lQ8BHN0 360 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Rap2cQ8BU31 183 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 RtknQ8C6B2 564 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Celf3Q8CIN6 465 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Adam32Q8K410 754 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ero1bQ8R2E9 467 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Sh3kbp1Q8R550 709 aaKnown RBP13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pex19Q8VCI5 299 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pard3bQ9CSB4 1203 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dcun1d1Q9QZ73 259 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gpc1Q9QZF2 557 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Atp11cQ9QZW0 1129 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Wnt8bQ9WUD6 350 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tnni1Q9WUZ5 187 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 AadatQ9WVM8 425 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Bmp15Q9Z0L4 392 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gm21731A0A286YDE9 180 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dhx35A2ACQ1 703 aaKnown RBP13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ttll8A4Q9F1 832 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 FancfE9Q5Z5 343 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gm8909G3UXE9 396 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Vmn2r70K7N702 854 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dmp1O55188 503 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Hsd17b7O88736 334 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Hsd11b2P51661 386 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Msx2Q03358 267 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Lag3Q61790 521 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Sel1l3Q80TS8 1137 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Suz12Q80U70 741 aaKnown RBP13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Alkbh8Q80Y20 664 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ireb2Q811J3 963 aaKnown RBP13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Iars2Q8BIJ6 1012 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Usp43Q8BUM9 1132 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Arhgap25Q8BYW1 648 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Twf1Q91YR1 350 aaKnown RBP13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Anxa13Q99JG3 317 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Unc45aQ99KD5 944 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 LiasQ99M04 373 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mccc1Q99MR8 717 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 4930519G04RikQ9CPT7 205 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 ProzQ9CQW3 399 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Agpat3Q9D517 376 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Rsph3bQ9DA80 389 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc29a1Q9JIM1 460 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Itgb1bp2Q9R000 350 aa13.16□□□□□ -0.3
Nup88-203ENSMUST00000108531 Trbv4A0A075B5I2 113 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Neu1O35657 409 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ap1g1P22892 822 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Atxn10P28658 475 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ccnd3P30282 292 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zc3h15Q3TIV5 426 aaKnown RBP13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Q3U4G0 281 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pde1aQ61481 565 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Rnf220Q6PDX6 566 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Sema3dQ8BH34 777 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fam49aQ8BHZ0 323 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ano4Q8C5H1 955 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Nlrp4bQ8C6J9 863 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Sulf1Q8K007 870 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Krt5Q922U2 580 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 CygbQ9CX80 190 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Polr3eQ9CZT4 710 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Lsm12Q9D0R8 195 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Clca1Q9D7Z6 913 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mettl7bQ9DD20 244 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Apobec2Q9WV35 224 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Nlrp12E9Q5R7 1054 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dcdc2bF7BCK0 340 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms