RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ptger3P30557 365 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 PorP37040 678 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 PrkcgP63318 697 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ddr1Q03146 911 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Bpifb5Q3UQ05 490 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Lsmem1Q3UQS2 128 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ofcc1Q8BGX4 166 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rbm22Q8BHS3 420 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Slc7a4Q8BLQ7 635 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Sh3rf2Q8BZT2 735 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Fam204aQ8C6C7 236 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rell1Q8K2J7 272 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ggt7Q99JP7 662 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cdkn2aipnlQ9D211 116 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tubd1Q9R1K7 455 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tdrd6P61407 2134 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Olfr663A0A1B0GSI9 319 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 C7D3YXF5 845 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm7073E9QAS1 335 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm14496K7N5U4 849 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 RaxO35602 342 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ctbp1O88712 441 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Faf2Q3TDN2 445 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Orc2Q60862 576 aaKnown RBP10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Susd6Q8BGE4 302 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Zfp719Q8BIV1 735 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cadm1Q8R5M8 456 aaKnown RBP10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 PlvapQ91VC4 438 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pcdha3Q91Y16 942 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gprc5bQ923Z0 410 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Zcchc8Q9CYA6 709 aaKnown RBP10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Hsf2bpQ9D4G2 338 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Wdr83Q9DAJ4 315 aaKnown RBP10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Kifc1Q9QWT9 674 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Slfn2Q9Z0I6 378 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm5415E9PXF3 478 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tnk2O54967 1055 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mybpc3O70468 1270 aaKnown RBP10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ccl4P14097 92 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 CptpQ8BS40 216 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 MmaaQ8C7H1 415 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Necab2Q91ZP9 389 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 ArpinQ9D0A3 226 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Capn9Q9D805 690 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tsc1Q9EP53 1161 aa10.16□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Igkv10-94A0A075B5L1 115 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ebf3O08791 596 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 CkmP07310 381 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Smpdl3bP58242 456 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tmprss9P69525 1065 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Irx1P81068 480 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 InscQ3HNM7 579 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Grm5Q3UVX5 1203 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Zdhhc24Q6IR37 284 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Sp140Q6NSQ5 534 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Q810S2 196 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tti1Q91V83 1085 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ndufs2Q91WD5 463 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Oas1cQ924S2 362 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Aco2Q99KI0 780 aaKnown RBP10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tssk3Q9D2E1 268 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Exoc2Q9D4H1 924 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Trpc4Q9QUQ5 974 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mbd1Q9Z2E2 636 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Plxna3P70208 1872 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 4933424G06RikA0A140LIP3 267 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm1141B9EJU1 475 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 CopeO89079 308 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gad2P48320 585 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Casp4P70343 373 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Frg1P97376 258 aaKnown RBP10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Six4Q61321 775 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cox8aQ64445 69 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Adam29Q811Q4 763 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rnf187Q8BFX1 236 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Stx16Q8BVI5 326 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gpr61Q8C010 449 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 LipmQ8K2A6 422 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mkl1Q8K4J6 964 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Acsf2Q8VCW8 615 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Oas1dQ8VI95 361 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Reep3Q99KK1 254 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ccdc124Q9D8X2 217 aaKnown RBP10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Plod1Q9R0E2 728 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm13089A2AGW7 455 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 6030498E09RikB1AX85 169 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pcdh9F8VPK8 1237 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Banf1O54962 89 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gna12P27600 379 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Drg1P32233 367 aaKnown RBP10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ntsr2P70310 416 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rab33aP97950 237 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tmem255bQ5FW56 369 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ric8bQ80XE1 520 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Nlrp10Q8CCN1 673 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 McmbpQ8R3C0 642 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Serpina3nQ91WP6 418 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Sema4fQ9Z123 777 aa10.15□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vps13aQ5H8C4 3166 aa10.15□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 JundP15066 341 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms