RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Pcsk1nQ9QXV0 258 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 RecqlQ9Z129 648 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Ern2Q9Z2E3 911 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Cylc2B1AWN8 422 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 CfhP06909 1234 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Epb41P48193 858 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Dpf3P58269 378 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Eif3eP60229 445 aaKnown RBP9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Hspa1aQ61696 641 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Ino80dQ66JY2 873 aaKnown RBP9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Sarm1Q6PDS3 724 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mtmr10Q7TPM9 771 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Cndp1Q8BUG2 492 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Cep57Q8CEE0 500 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mark4Q8CIP4 752 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Vps36Q91XD6 386 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 PmpcbQ9CXT8 489 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Btbd35f21A0A140T8Q5 498 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Gm4869A0A1B0GSG7 984 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 SmoktcrA2KF29 484 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Btbd35f22J3QN64 498 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Serpinb9eO08806 377 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Tuba4aP68368 448 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mpp1P70290 466 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Tgfbrap1Q3UR70 860 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Sult1d1Q3UZZ6 295 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Trim67Q505D9 768 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Chsy3Q5DTK1 884 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 CttnQ60598 546 aaKnown RBP9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Rfx4Q7TNK1 735 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Zfp454Q80Y34 536 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Pip4k2cQ91XU3 421 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Trem2Q99NH8 227 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Lyrm1Q9CQB7 122 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Plxnb3Q9QY40 1902 aa9.35□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Clcn7O70496 803 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 InhbaQ04998 424 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Rab26Q504M8 260 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Srrm1Q52KI8 946 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 FAM120AQ6A0A9 1112 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Ggnbp1Q6K1E7 370 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Znf513Q6PD29 541 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Tdpoz2Q717B2 364 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Dhx32Q8BZS9 744 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Plekhg6Q8R0J1 787 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Olfr1494Q8VGP8 315 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Atp5c1Q91VR2 298 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Dennd2dQ91VV4 469 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mrps18aQ99N85 196 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 ThadaA8C756 1938 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Ms4a14A0A087WSD2 1232 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Map7d3A2AEY4 876 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup10A2BIN1 180 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup14A2CEK7 180 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup19A9C497 187 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup15A9R9W0 180 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup17B5X0G2 180 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup8E9PVW0 235 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup7E9QA79 235 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Gml2G5E8L7 176 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Vmn2r44L7N2E1 861 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup6P02762 180 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup1P11588 180 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mup2P11589 180 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Cd247P24161 164 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Q32M26 199 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Hace1Q3U0D9 909 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Pdk1Q8BFP9 434 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Atg14Q8CDJ3 492 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 MyocdQ8VIM5 935 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Afg3l1Q920A7 789 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Mcrs1Q99L90 462 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Ergic3Q9CQE7 383 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Maf1Q9D0U6 258 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Clca1Q9D7Z6 913 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Gm13040A2A8C4 496 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Gm13101A2ASJ0 481 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Itih4A6X935 942 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Gm13119B1ARV5 481 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Vmn2r84D3YWE3 849 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Alas2P08680 587 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Psmd3P14685 530 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Ccna2P51943 422 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Hcrtr1P58307 416 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Serpina6Q06770 397 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Q3TQQ9 903 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Hesx1Q61658 185 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 ErfeQ6PGN1 340 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Tmem132dQ76HP3 1097 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Moxd2Q7TT41 619 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Prdx6bQ8BG37 224 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Trub1Q8C0D0 338 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Atg16l1Q8C0J2 607 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Rfx6Q8C7R7 927 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Trim32Q8CH72 655 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Klhl2Q8JZP3 593 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Sf3b4Q8QZY9 424 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 NeproQ8R2U2 564 aa9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 HnrnprQ8VHM5 632 aaKnown RBP9.34□□□□□ -0.91
Ccdc171-201ENSMUST00000053414 Trex1Q91XB0 314 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms