RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rnf138rt1Q9D9M9 248 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Trim54Q9ERP3 366 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Plod3Q9R0E1 741 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gria4Q9Z2W8 902 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Atad5Q4QY64 1826 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cyp4f17G3UW78 524 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ptpn9O35239 593 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Itgb3O54890 787 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Camk4P08414 469 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Arl4aP61213 200 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 HpcaP84075 193 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Hexim2Q3TVI4 313 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Trappc3lQ4KL14 181 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cspg5Q71M36 566 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Zbtb5Q7TQG0 670 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Olfr1037Q7TR84 321 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mis18bp1Q80WQ8 998 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Armc12Q80X86 340 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mapkap1Q8BKH7 522 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Asb7Q91ZU0 318 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Prpf19Q99KP6 504 aaKnown RBP13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cyp4f16Q99N17 524 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ppil2Q9D787 521 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Chrnb2Q9ERK7 501 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm44511A0A0N4SW10 223 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Skint1A7TZE6 364 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vmn2r96E9PZU5 664 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm7942L7N277 499 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kng1O08677 661 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 NoctO35710 429 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mtco1P00397 514 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Sox8Q04886 464 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fscn2Q32M02 492 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Trafd1Q3UDK1 580 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Sel1l3Q80TS8 1137 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cndp1Q8BUG2 492 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Atg14Q8CDJ3 492 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Nkiras1Q8CEC5 192 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Olfr1325Q8VF43 315 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 HnmtQ91VF2 295 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Me2Q99KE1 589 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dis3Q9CSH3 958 aaKnown RBP13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Serbp1Q9CY58 407 aaKnown RBP13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Arl2Q9D0J4 184 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tubgcp4Q9D4F8 667 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cpxm1Q9Z100 722 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Slc23a1Q9Z2J0 605 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kcnq2Q9Z351 759 aa13.69□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm8909G3UXE9 396 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 ZfrO88532 1074 aaKnown RBP13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Lmo2P25801 158 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fermt1P59113 677 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Atp9bP98195 1146 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Trim67Q505D9 768 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Nlrp9cQ66X01 1004 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 4930503B20RikQ80ZP0 234 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Clptm1lQ8BXA5 539 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Serpinb10Q8K1K6 397 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gsg1Q8R1W2 324 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rem2Q8VEL9 341 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vangl2Q91ZD4 521 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rnf31Q924T7 1066 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rtfdc1Q99K95 307 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Zmat2Q9CPW7 199 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mrpl57Q9CQF8 102 aaKnown RBP13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mrpl17Q9D8P4 176 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Stk19Q9JHN8 254 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Trpm5Q9JJH7 1158 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gfra4Q9JJT2 260 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 VapbQ9QY76 243 aaKnown RBP13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tbk1Q9WUN2 729 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dhx35A2ACQ1 703 aaKnown RBP13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Slc4a11A2AJN7 862 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 PotegA5H0M4 473 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Acp4D3YTS9 425 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Trim5E9PV98 497 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 C87414E9PWI7 475 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vmn2r100E9QAZ9 850 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm5145F8VQ88 278 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Acot1O55137 419 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Scd1P13516 355 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Il12aP43431 215 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Znf148Q61624 794 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rasa4Q6PFQ7 802 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rpl10Q6ZWV3 214 aaKnown RBP13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Stk40Q7TNL3 435 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kcng4Q80XM3 506 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Atp6v1g3Q8BMC1 118 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Zfp398Q8BV16 643 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Asb14Q8C6Y6 587 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cabcoco1Q8CDT7 208 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kct2Q8K201 259 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dhrs7bQ99J47 323 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tma16Q9CR02 221 aaKnown RBP13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Spata9Q9D9R3 252 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ampd2Q9DBT5 798 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cyp4f14Q9EP75 524 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rnf11Q9QYK7 154 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dnajc12Q9R022 198 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Apobec2Q9WV35 224 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 61.8 ms