RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Fbxo28Q8BIG4 368 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Enpp4Q8BTJ4 456 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Guf1Q8C3X4 651 aaKnown RBP23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Uxs1Q91XL3 420 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Kifc1Q9QWT9 674 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Usp32F8VPZ3 1604 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Snx3O70492 162 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 CebpaP53566 359 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Ppm1jQ149T7 507 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Atp2c1Q80XR2 918 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Chaf1bQ9D0N7 572 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Cul2Q9D4H8 745 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Crb1Q8VHS2 1405 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Nfatc2ipO09130 412 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 HalP35492 657 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Evi2bQ8VD58 444 aa23.53■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 EpoP07321 192 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Slc1a2P43006 572 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Fam129aQ3UW53 926 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Slc9b2Q5BKR2 547 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Pitrm1Q8K411 1036 aaKnown RBP23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Asb11Q9CQ31 323 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Prss40A6H6T1 365 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Sema6aO35464 1031 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Capn6O35646 641 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 JchainP01592 159 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Hpcal1P62748 193 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Tgfbrap1Q3UR70 860 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Dennd5aQ6PAL8 1287 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Socs4Q91ZA6 436 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Atg7Q9D906 698 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Slc13a2Q9ES88 586 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 AglF8VPN4 1532 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Znf804aA2AKY4 1200 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Hsd17b7O88736 334 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 PcnaP17918 261 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Pou2f3P31362 431 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Pih1d3Q3KNI6 218 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Lpcat2Q8BYI6 544 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Lamtor4Q8CF66 99 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Q9D1F3 157 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Ifrd2Q9D8U0 441 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Osbpl8B9EJ86 889 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 CttnQ60598 546 aaKnown RBP23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Olfr169Q7TS53 313 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Nrxn1Q9CS84 1514 aa23.52■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 AlpiF8VPQ6 554 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Mtnd2P03893 345 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Aldh3a1P47739 453 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Morf4l1P60762 362 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Syn2Q64332 586 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 DstykQ6XUX1 927 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Angel1Q8VCU0 667 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Oxnad1Q8VE38 311 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Dnajc14Q921R4 703 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Mcm8Q9CWV1 833 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Klrc2Q9WTJ9 238 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Q8BH50 245 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Man2a2Q8BRK9 1152 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Ints11Q9CWS4 600 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Mtmr9Q9Z2D0 545 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Fam205a1D3YZF6 1314 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 MylpfP97457 169 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Rad51Q08297 339 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Stt3bQ3TDQ1 823 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Fam131bQ3TY60 332 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 PostnQ62009 838 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Lrrc42Q8R2U7 421 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Dnajc5bQ9CQ94 199 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Umodl1Q5DID3 1319 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Zbed5B2RPU8 756 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Sptlc1O35704 473 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Atg4cQ811C2 458 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Atp6v1hQ8BVE3 483 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Asb2Q8K0L0 634 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Vmp1Q99KU0 406 aa23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Tma16Q9CR02 221 aaKnown RBP23.51■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Fcer2P20693 331 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Oprl1P35377 367 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Lad1P57016 528 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Kpna1Q60960 538 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Snapc1Q8K0S9 389 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Mtrf1Q8K126 446 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Epn3Q91W69 636 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Commd8Q9CZG3 183 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Kif12Q9D2Z8 642 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Syvn1Q9DBY1 612 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Ap3s1Q9DCR2 193 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Celf5D3Z4T1 395 aaKnown RBP23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Il13ra2O88786 383 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 MipP51180 263 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 AcadsQ07417 412 aaKnown RBP23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 LvrnQ2KHK3 559 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Rab26Q504M8 260 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Mbtd1Q6P5G3 631 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Olfr798Q7TRH8 311 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Nsmce2Q91VT1 247 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Chid1Q922Q9 393 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Scd3Q99PL7 359 aa23.5■■□□□ 1.35
Sh3rf1-201ENSMUST00000034060 Snrnp48Q9D361 337 aa23.5■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms