RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 VPS28Q9UK41 221 aa16.29■□□□□ 0.2
SPIN3-233ENST00000640039 INTS6Q9UL03 887 aaKnown RBP16.29■□□□□ 0.2
SPIN3-233ENST00000640039 TBC1D30Q9Y2I9 924 aa16.29■□□□□ 0.2
SPIN3-233ENST00000640039 DCHS1Q96JQ0 3298 aa16.29■□□□□ 0.2
SPIN3-233ENST00000640039 CACNA1AO00555 2505 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 PRPSAP2O60256 369 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 RPP40O75818 363 aaKnown RBP16.28■□□□□ 0.2
SPIN3-233ENST00000640039 LMNAP02545 664 aaKnown RBP16.28■□□□□ 0.2
SPIN3-233ENST00000640039 H2AFZP0C0S5 128 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 PRKCHP24723 683 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 MZF1P28698 734 aaPredicted RBP16.28■□□□□ 0.2
SPIN3-233ENST00000640039 NNMTP40261 264 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 ECT2LQ008S8 904 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 ENPP2Q13822 863 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 SIM2Q14190 667 aaPredicted RBP16.28■□□□□ 0.2
SPIN3-233ENST00000640039 PIGHQ14442 188 aaPredicted RBP16.28■□□□□ 0.2
SPIN3-233ENST00000640039 ACAP1Q15027 740 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 USP39Q53GS9 565 aaKnown RBP16.28■□□□□ 0.2
SPIN3-233ENST00000640039 KIAA1211LQ6NV74 962 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 H2AFVQ71UI9 128 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 APCDD1Q8J025 514 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 TC2NQ8N9U0 490 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 GAB3Q8WWW8 586 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 EPAS1Q99814 870 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 RETREG1Q9H6L5 497 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 CTTNBP2NLQ9P2B4 639 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 FZD10Q9ULW2 581 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 NENFQ9UMX5 172 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 ERVW-1Q9UQF0 538 aa16.28■□□□□ 0.2
SPIN3-233ENST00000640039 DOCK4Q8N1I0 1966 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 MYO1FO00160 1098 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 LRIG2O94898 1065 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 SRPRAP08240 638 aaKnown RBP16.27■□□□□ 0.2
SPIN3-233ENST00000640039 HLA-EP13747 358 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 GABRG2P18507 467 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 L1CAMP32004 1257 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 PLK1P53350 603 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 KRT83P78385 493 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 ZNF252P-AS1Q0IIN9 211 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 SRSF5Q13243 272 aaKnown RBP16.27■□□□□ 0.2
SPIN3-233ENST00000640039 BYSLQ13895 437 aaKnown RBP16.27■□□□□ 0.2
SPIN3-233ENST00000640039 PTPRNQ16849 979 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 MANEALQ5VSG8 457 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 ZNF564Q8TBZ8 553 aaPredicted RBP16.27■□□□□ 0.2
SPIN3-233ENST00000640039 ARHGEF26Q96DR7 871 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 SPACA7Q96KW9 195 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 FEM1AQ9BSK4 669 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 EPC1Q9H2F5 836 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 TMEM245Q9H330 911 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 SPTLC3Q9NUV7 552 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 UVRAGQ9P2Y5 699 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 SUN2Q9UH99 717 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 PCSK1NQ9UHG2 260 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 IP6K2Q9UHH9 426 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 SLC25A13Q9UJS0 675 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 AP4E1Q9UPM8 1137 aa16.27■□□□□ 0.2
SPIN3-233ENST00000640039 SMG5Q9UPR3 1016 aaKnown RBP16.27■□□□□ 0.2
SPIN3-233ENST00000640039 GOLGA6L6A8MZA4 724 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 EIF3CLB5ME19 914 aaKnown RBP16.26■□□□□ 0.19
SPIN3-233ENST00000640039 FAM72CH0Y354 149 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 HRO43593 1189 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 CREB3O43889 395 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 RHOQP17081 205 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 NDUFV2P19404 249 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 EPHB2P29323 1055 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 MIPP30301 263 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 PCK1P35558 622 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 NUMBP49757 651 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 FOXK2Q01167 660 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 ERMARDQ5T6L9 678 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 FAM72AQ5TYM5 149 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 FAM72DQ6L9T8 149 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 KIAA1324Q6UXG2 1013 aaKnown RBP16.26■□□□□ 0.19
SPIN3-233ENST00000640039 ZNF783Q6ZMS7 281 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 FAM72BQ86X60 149 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 PYROXD2Q8N2H3 581 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 ZNF366Q8N895 744 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 KDM1BQ8NB78 822 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 EIF3CQ99613 913 aaKnown RBP16.26■□□□□ 0.19
SPIN3-233ENST00000640039 C2orf49Q9BVC5 232 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-233ENST00000640039 PACSIN1Q9BY11 444 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 DHX35Q9H5Z1 703 aaKnown RBP16.26■□□□□ 0.19
SPIN3-233ENST00000640039 FBRSQ9HAH7 460 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 USP18Q9UMW8 372 aa16.26■□□□□ 0.19
SPIN3-233ENST00000640039 MUC22E2RYF6 1773 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-233ENST00000640039 CEP250Q9BV73 2442 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 CKAP5Q14008 2032 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 ILVBLA1L0T0 632 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 LRCH4O75427 683 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 TMEM253P0C7T8 217 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 HTR7P34969 479 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 ETFBP38117 255 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 CTSOP43234 321 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-233ENST00000640039 MAPKAPK2P49137 400 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 TPI1P60174 286 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 CAMK2GQ13555 558 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-233ENST00000640039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-233ENST00000640039 C11orf74Q86VG3 221 aa16.25■□□□□ 0.19
SPIN3-233ENST00000640039 PSTKQ8IV42 348 aaKnown RBP16.25■□□□□ 0.19
SPIN3-233ENST00000640039 NIPA2Q8N8Q9 360 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms