RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SRBD1Q8N5C6 995 aaKnown RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 ENDOVQ8N8Q3 282 aaKnown RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 GPR150Q8NGU9 434 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 SCFD2Q8WU76 684 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 VOPP1Q96AW1 172 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 FAM120BQ96EK7 910 aaKnown RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 TTC14Q96N46 770 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 NR1H4Q96RI1 486 aaPredicted RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 YME1L1Q96TA2 773 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 HTATIP2Q9BUP3 242 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 CDCP1Q9H5V8 836 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 SAP30LQ9HAJ7 183 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 TLR8Q9NR97 1041 aaKnown RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 MPP6Q9NZW5 540 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 KLQ9UEF7 1012 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 AMFRQ9UKV5 643 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 VPS4AQ9UN37 437 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 FAM170AA1A519 330 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 NPIPB15A6NHN6 443 aaPredicted RBP6.89□□□□□ -1.31
RFC1-217ENST00000639695 AP4M1O00189 453 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 TNFSF14O43557 240 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 SEC14L2O76054 403 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 PEX11BO96011 259 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 CYP4B1P13584 511 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 PROZP22891 400 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 BMPR1AP36894 532 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 CLCN2P51788 898 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 MVDP53602 400 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 SNX16P57768 344 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 ARHGAP8P85298 464 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 DEUP1Q05D60 604 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 TBC1D25Q3MII6 688 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 LAIR1Q6GTX8 287 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 SLC30A6Q6NXT4 461 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 CNTROBQ8N137 903 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 ADPRHL1Q8NDY3 354 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 LPIN2Q92539 896 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 NCSTNQ92542 709 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 CNOT9Q92600 299 aaKnown RBP6.89□□□□□ -1.31
RFC1-217ENST00000639695 PRR25Q96S07 402 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 BAG1Q99933 345 aaPredicted RBP6.89□□□□□ -1.31
RFC1-217ENST00000639695 NPLQ9BXD5 320 aaPredicted RBP6.89□□□□□ -1.31
RFC1-217ENST00000639695 TRIM31Q9BZY9 425 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 FTOQ9C0B1 505 aaKnown RBP eCLIP6.89□□□□□ -1.31
RFC1-217ENST00000639695 CTDSP1Q9GZU7 261 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 SMARCAD1Q9H4L7 1026 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 USP29Q9HBJ7 922 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 ERVK-5Q9HDB9 667 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 SH3GLB2Q9NR46 395 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 KLC4Q9NSK0 619 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 ZDHHC7Q9NXF8 308 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 EHD3Q9NZN3 535 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 EHD2Q9NZN4 543 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 LIMA1Q9UHB6 759 aaKnown RBP6.89□□□□□ -1.31
RFC1-217ENST00000639695 GABRQQ9UN88 632 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 PASKQ96RG2 1323 aa6.89□□□□□ -1.31
RFC1-217ENST00000639695 C16orf96A6NNT2 1141 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 TTC34A8MYJ7 566 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 C1RP00736 705 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 RPN1P04843 607 aaKnown RBP6.88□□□□□ -1.31
RFC1-217ENST00000639695 URODP06132 367 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 HNF1BP35680 557 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 RGS2P41220 211 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 CPA2P48052 419 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 JAK3P52333 1124 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 NLRP5P59047 1200 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 E2F1Q01094 437 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 EPS8Q12929 822 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 BMPR2Q13873 1038 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 BECN1Q14457 450 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 SF3B3Q15393 1217 aaKnown RBP6.88□□□□□ -1.31
RFC1-217ENST00000639695 BEAN1Q3B7T3 259 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 DUSP28Q4G0W2 176 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 CYP20A1Q6UW02 462 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 DPY19L3Q6ZPD9 716 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 PARS2Q7L3T8 475 aaKnown RBP6.88□□□□□ -1.31
RFC1-217ENST00000639695 CCDC191Q8NCU4 936 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 CPEB3Q8NE35 698 aaKnown RBP6.88□□□□□ -1.31
RFC1-217ENST00000639695 MYCBPAPQ8TBZ2 947 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 PRR11Q96HE9 360 aaPredicted RBP6.88□□□□□ -1.31
RFC1-217ENST00000639695 ELOVL1Q9BW60 279 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 TTC12Q9H892 705 aaPredicted RBP6.88□□□□□ -1.31
RFC1-217ENST00000639695 PCDHB16Q9NRJ7 776 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 MTMR4Q9NYA4 1195 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 SLC25A13Q9UJS0 675 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 PCDHGB4Q9UN71 923 aa6.88□□□□□ -1.31
RFC1-217ENST00000639695 A0A0U1RQG5 324 aaPredicted RBP6.87□□□□□ -1.31
RFC1-217ENST00000639695 MYO1GB0I1T2 1018 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 SYN3O14994 580 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 FAM20BO75063 409 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 RHOP08100 348 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 SLC8A1P32418 973 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 PPARGP37231 505 aaPredicted RBP6.87□□□□□ -1.31
RFC1-217ENST00000639695 PSMB10P40306 273 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 FAM189BP81408 668 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 GOLGA8DPQ0D2H9 430 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 CRYMQ14894 314 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 ERCC6LQ2NKX8 1250 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 SLC39A5Q6ZMH5 540 aa6.87□□□□□ -1.31
RFC1-217ENST00000639695 SZRD1Q7Z422 152 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms