RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 STX16-NPEPL1H3BU86 382 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 STX16O14662 325 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 LYNP07948 512 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 MAPK1P28482 360 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 RPL9P32969 192 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 C7orf25Q9BPX7 421 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 TRIM9Q9C026 710 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 RPS6KA6Q9UK32 745 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 TMEM120BA0PK00 339 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 INPP4BO15327 924 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 FOXN1O15353 648 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 ABL2P42684 1182 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 POLD2P49005 469 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 CLCN3P51790 818 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 ADARP55265 1226 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 TARS2Q9BW92 718 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 ATAD3AQ9NVI7 634 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 A0A096LPK6 155 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 CCDC154A6NI56 674 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 CBX5P45973 191 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 CCL23P55773 120 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 MTF1Q14872 753 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 KCTD8Q6ZWB6 473 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 TRIM2Q9C040 744 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 DNMT3LQ9UJW3 386 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 H3BMM5 538 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 IL1R1P14778 569 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 CASP4P49662 377 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 VPS33AQ96AX1 596 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 ELMO3Q96BJ8 720 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 F8VZ95 297 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 HOXA2O43364 376 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 SEC22BO75396 215 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 CRATP43155 626 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 USP41Q3LFD5 358 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 NKD1Q969G9 470 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 RAD51AP1Q96B01 352 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 AHCYL1O43865 530 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 MSX1P28360 303 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 EFCAB3Q8N7B9 438 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 VPS33BQ9H267 617 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 STOML2Q9UJZ1 356 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 CRYL1Q9Y2S2 319 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 PPP1R37O75864 691 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 KCNJ5P48544 419 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 HK2P52789 917 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 KCNB2Q92953 911 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 SEMA6AQ9H2E6 1030 aa16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 HMX1Q9NP08 348 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF806P0C7X5 589 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 FOXO4P98177 505 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 LRRC70Q7Z2Q7 622 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 CNPY3Q9BT09 278 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 PPCSQ9HAB8 311 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 TRPM1Q7Z4N2 1603 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 ATXN2Q99700 1313 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 BHMG1C9JSJ3 638 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 GPATCH2LQ9NWQ4 482 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 AAR2Q9Y312 384 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 MGRN1O60291 552 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 PLPP4Q5VZY2 271 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 TAF2Q6P1X5 1199 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF655Q8N720 491 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 OR5T3Q8NGG3 340 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 AGPAT5Q9NUQ2 364 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 PDHBP11177 359 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 CENPCQ03188 943 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 MYBPC2Q14324 1141 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 MXRA8Q9BRK3 442 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 TUBGCP4Q9UGJ1 667 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF879B4DU55 563 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 PPIL6Q8IXY8 311 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D24Q9ULP9 559 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 CCDC163A0A0D9SF12 145 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 MAGEB3O15480 346 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 SMCO1Q147U7 214 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 CBWD1Q9BRT8 395 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 SNTG2Q9NY99 539 aa16.6■□□□□ 0.25
CACNA1A-258ENST00000638029 BPNT1O95861 308 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 NUDT5Q9UKK9 219 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 SMCO3A2RU48 225 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 SLC26A4O43511 780 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 COMTP21964 271 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 PAX7P23759 505 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 ACADLP28330 430 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 PPP2R2BQ00005 443 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 GFOD2Q3B7J2 385 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBCELQ5QJ74 424 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF677Q86XU0 584 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 RIBC1Q8N443 379 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF483Q8TF39 744 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 CHMP1AQ9HD42 196 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 SETD4Q9NVD3 440 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 EHD3Q9NZN3 535 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 HEY2Q9UBP5 337 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms