RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 TRIM59Q8IWR1 403 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 ATP6V0D2Q8N8Y2 350 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 EHBP1Q8NDI1 1231 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 STK32AQ8WU08 396 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 NXPE2Q96DL1 559 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 LRIG1Q96JA1 1093 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 CNDP2Q96KP4 475 aaKnown RBP14.94□□□□□ -0.02
TUBB3-215ENST00000625617 SPAG5Q96R06 1193 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 MED15Q96RN5 788 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 FAM129BQ96TA1 746 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 SLC4A5Q9BY07 1137 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 FAM204AQ9H8W3 233 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 CNTN6Q9UQ52 1028 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.94□□□□□ -0.02
TUBB3-215ENST00000625617 ACACAQ13085 2346 aa14.94□□□□□ -0.02
TUBB3-215ENST00000625617 A0A1B0GVM2 712 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 A0A1W2PR77 199 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 C10orf142B7Z368 130 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 THAP12O43422 761 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 RFPL3O75679 317 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 LDOC1O95751 146 aaPredicted RBP14.93□□□□□ -0.02
TUBB3-215ENST00000625617 GNA14O95837 355 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 GNA15P30679 374 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 HNF1BP35680 557 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 NUMBP49757 651 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 PPP2CBP62714 309 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 YWHAZP63104 245 aaKnown RBP14.93□□□□□ -0.02
TUBB3-215ENST00000625617 PPP2CAP67775 309 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 SULT2A1Q06520 285 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 PDCLQ13371 301 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 SLC12A1Q13621 1099 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 SHBQ15464 509 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 SOWAHCQ53LP3 525 aaPredicted RBP14.93□□□□□ -0.02
TUBB3-215ENST00000625617 RABGAP1LQ5R372 815 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 NAPEPLDQ6IQ20 393 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 DSG4Q86SJ6 1040 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 CCAR2Q8N163 923 aaKnown RBP14.93□□□□□ -0.02
TUBB3-215ENST00000625617 OXR1Q8N573 874 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 SAP25Q8TEE9 199 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 PTPRN2Q92932 1015 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 THAP9Q9H5L6 903 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 SLC12A6Q9UHW9 1150 aa14.93□□□□□ -0.02
TUBB3-215ENST00000625617 PLXNB3Q9ULL4 1909 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 KNL1Q8NG31 2342 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 A0A087WV48 116 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 KCNU1A8MYU2 1149 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 CBX4O00257 560 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 PLK4O00444 970 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 WNT9AO14904 365 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 LATO43561 262 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 SLC2A3P11169 496 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 CDK4P11802 303 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 VAV1P15498 845 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 DRD3P35462 400 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 ACADVLP49748 655 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 OXCT1P55809 520 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 MARSP56192 900 aaKnown RBP14.92□□□□□ -0.02
TUBB3-215ENST00000625617 NXPH1P58417 271 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 PITX1P78337 314 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-215ENST00000625617 PAK1Q13153 545 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 DNAJC3Q13217 504 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 ENOSF1Q7L5Y1 443 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 TMEM110Q86TL2 294 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 ELOA2Q8IYF1 753 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-215ENST00000625617 OR8D1Q8WZ84 308 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 PRMT1Q99873 361 aaKnown RBP14.92□□□□□ -0.02
TUBB3-215ENST00000625617 UBE2TQ9NPD8 197 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-215ENST00000625617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.92□□□□□ -0.024e-7■■■□□ 18.7
TUBB3-215ENST00000625617 DDIT4Q9NX09 232 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 CYTH4Q9UIA0 394 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 CABIN1Q9Y6J0 2220 aa14.92□□□□□ -0.02
TUBB3-215ENST00000625617 FASNP49327 2511 aaKnown RBP14.91□□□□□ -0.02
TUBB3-215ENST00000625617 SYNJ2BP-COX16A0A087WUM0 186 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3DA0A087WVF3 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3IA0A087WXS9 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3EA0A087X179 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3KA0A087X1G2 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3FA6NER0 549 aaPredicted RBP14.91□□□□□ -0.02
TUBB3-215ENST00000625617 PPP1R3GB7ZBB8 358 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3LB9A6J9 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TLR4O00206 839 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 SLC7A4O43246 635 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 C1SP09871 688 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3HP0C7X1 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 JUPP14923 745 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 BMP6P22004 513 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 CCR1P32246 355 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 STX17P56962 302 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 CDK17Q00537 523 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 CENPCQ03188 943 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 C6orf118Q5T5N4 469 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 FAM46CQ5VWP2 391 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3GQ6DHY5 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3CQ6IPX1 549 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 CXorf57Q6NSI4 855 aaKnown RBP14.91□□□□□ -0.02
TUBB3-215ENST00000625617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.91□□□□□ -0.02
TUBB3-215ENST00000625617 TBC1D3Q8IZP1 549 aaPredicted RBP14.91□□□□□ -0.02
TUBB3-215ENST00000625617 EID2Q8N6I1 236 aa14.91□□□□□ -0.02
TUBB3-215ENST00000625617 FRS2Q8WU20 508 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms