RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 VAT1Q99536 393 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 THTPAQ9BU02 230 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 GBA3Q9H227 469 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 VCXQ9H320 206 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 PIGVQ9NUD9 493 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 KLK14Q9P0G3 267 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 SEPT10Q9P0V9 454 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 KLHL8Q9P2G9 620 aaPredicted RBP9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 TXNDC16Q9P2K2 825 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 MID2Q9UJV3 735 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 PIN4Q9Y237 131 aaKnown RBP9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 IPPQ9Y573 584 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 CDY2AQ9Y6F7 541 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 CDY1Q9Y6F8 540 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 RPS6KL1Q9Y6S9 549 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 WASF2Q9Y6W5 498 aa9.84□□□□□ -0.83
IGHV3-54-201ENST00000622166 MYO18AQ92614 2054 aaKnown RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 MAGEA13PA6NCF6 341 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 F5H423 210 aaPredicted RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 G3V2L1 256 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CLDN5O00501 218 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 NRP1O14786 923 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ADCY6O43306 1168 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 TIMM44O43615 452 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CREB3O43889 395 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 SIN3BO75182 1162 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 APOA4P06727 396 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 PDHA1P08559 390 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 FAM200BP0CF97 657 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 SP100P23497 879 aaPredicted RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CRABP2P29373 138 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ARRB2P32121 409 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CD68P34810 354 aaPredicted RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 TKTL1P51854 596 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 GTF2A2P52657 109 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 HK2P52789 917 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 COPAP53621 1224 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 TPI1P60174 286 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 MXRA7P84157 204 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZNF33AQ06730 810 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 HNRNPDQ14103 355 aaKnown RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 HIC1Q14526 733 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 FSCBQ5H9T9 825 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 WSCD1Q658N2 575 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 PDPK2PQ6A1A2 396 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 TMEM154Q6P9G4 183 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 EPGNQ6UW88 154 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 STRA8Q7Z7C7 330 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 LCA5Q86VQ0 697 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 KBTBD2Q8IY47 623 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 SCML4Q8N228 414 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 TMEM86AQ8N2M4 240 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 NME8Q8N427 588 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 RNF169Q8NCN4 708 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ARRDC4Q8NCT1 418 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 NPLOC4Q8TAT6 608 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 RDH11Q8TC12 318 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ACTRT2Q8TDY3 377 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 TMEM40Q8WWA1 233 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 DNAJB3Q8WWF6 145 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 DPF3Q92784 378 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 GATA6Q92908 595 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZNF669Q96BR6 464 aaPredicted RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CLPTM1LQ96KA5 538 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 PPP1R10Q96QC0 940 aaKnown RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZNF184Q99676 751 aaPredicted RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 SYT15Q9BQS2 421 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 MED10Q9BTT4 135 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 MLPHQ9BV36 600 aaPredicted RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ULBP1Q9BZM6 244 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CDH19Q9H159 772 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 S100A14Q9HCY8 104 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CRTAC1Q9NQ79 661 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 CNGB3Q9NQW8 809 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 RNF19AQ9NV58 838 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZDHHC7Q9NXF8 308 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 NSMCE4AQ9NXX6 385 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 VANGL2Q9ULK5 521 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 GNEQ9Y223 722 aaKnown RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 GINS2Q9Y248 185 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 ANKRD6Q9Y2G4 727 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 PTCH2Q9Y6C5 1203 aa9.83□□□□□ -0.84
IGHV3-54-201ENST00000622166 HHLA1C9JL84 531 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 FAM72CH0Y354 149 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 PTGESO14684 152 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZBTB24O43167 697 aaPredicted RBP9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 DYNC1LI2O43237 492 aaPredicted RBP9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 BUD23O43709 281 aaKnown RBP9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 CACNG3O60359 315 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 TRIM13O60858 407 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 F9P00740 461 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 GLDCP23378 1020 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 EPHX2P34913 555 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 LHX1P48742 406 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 POLD2P49005 469 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 CXCR3P49682 368 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 PSEN1P49768 467 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms