RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PFKPQ01813 784 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 FUT11Q495W5 492 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 ATP6AP1LQ52LC2 224 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MSL3Q8N5Y2 521 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MAB21L3Q8N8X9 362 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TDRD5Q8NAT2 981 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SCN3BQ9NY72 215 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SOX13Q9UN79 622 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SHOC2Q9UQ13 582 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MRPL42Q9Y6G3 142 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SMIM35A0A1B0GVV1 85 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ZSCAN5CA6NGD5 496 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SEPT4O43236 478 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 HNRNPCP07910 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 GJB1P08034 283 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PSRC1Q6PGN9 363 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ACTL9Q8TC94 416 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ZMAT2Q96NC0 199 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SH3GL1Q99961 368 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 MLPHQ9BV36 600 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PRRG3Q9BZD7 231 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 TM6SF2Q9BZW4 377 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 LACRTQ9GZZ8 138 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ZC4H2Q9NQZ6 224 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 OR12D3Q9UGF7 316 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 POLG2Q9UHN1 485 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 DUSP10Q9Y6W6 482 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 LOC100653049A0A140TA62 436 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SPATA31C2B4DYI2 1134 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SMIM22K7EJ46 135 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 EML1O00423 815 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 GCATO75600 419 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 KRT34O76011 436 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 NPY2RP49146 381 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CLK3P49761 638 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 TBX2Q13207 712 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CRY1Q16526 586 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 DAB2IPQ5VWQ8 1189 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 XRN1Q8IZH2 1706 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 MCOLN2Q8IZK6 566 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SPPL2BQ8TCT7 592 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 VCPIP1Q96JH7 1222 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 TBL1YQ9BQ87 522 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 C11orf84Q9BUA3 381 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SEZ6LQ9BYH1 1024 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 GULP1Q9UBP9 304 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PSME2Q9UL46 239 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 NDRG2Q9UN36 371 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC27A6Q9Y2P4 619 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 UBIAD1Q9Y5Z9 338 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 KCNK1O00180 336 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ACSL4O60488 711 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CNPP09543 421 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CXCR2P25025 360 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PIK3CGP48736 1102 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ST3GAL1Q11201 340 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 MAPK7Q13164 816 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PKN1Q16512 942 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 MIER2Q8N344 545 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ELMO1Q92556 727 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 DLGAP2Q9P1A6 1054 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 hCG_2014768A0A024R1R8 64 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 TLR5O60602 858 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 OR6A2O95222 327 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC2A4P14672 509 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SERPINB10P48595 397 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SULT2A1Q06520 285 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SPIDRQ14159 915 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CNGA3Q16281 694 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 FLCNQ8NFG4 579 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CYGBQ8WWM9 190 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 RSPH1Q8WYR4 309 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 RERGQ96A58 199 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 HSFY1Q96LI6 401 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 SERPINB12Q96P63 405 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 FAM111AQ96PZ2 611 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 TSPAN18Q96SJ8 248 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 DNAJC16Q9Y2G8 782 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PCDHAC2Q9Y5I4 1007 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ADGRB2O60241 1585 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 KATNA1O75449 491 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 MMP3P08254 477 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 MYBL2P10244 700 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 VHLP40337 213 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 GPR15P49685 360 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 UBE3AQ05086 875 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 FPGSQ05932 587 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 MAD2L1Q13257 205 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ZNHIT3Q15649 155 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ARID3BQ8IVW6 561 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CENPLQ8N0S6 344 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 FBXO39Q8N4B4 442 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ZYG11BQ9C0D3 744 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 CDT1Q9H211 546 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 TRIT1Q9H3H1 467 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 ARL15Q9NXU5 204 aa9.97□□□□□ -0.81
CLTCL1-211ENST00000621271 PTCH2Q9Y6C5 1203 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms