RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 UAP1L1Q3KQV9 507 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 FOXB2Q5VYV0 432 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 HEATR6Q6AI08 1181 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PKN3Q6P5Z2 889 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 TAF8Q7Z7C8 310 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 IQCF2Q8IXL9 164 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 GINS4Q9BRT9 223 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 FBXO28Q9NVF7 368 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SLC24A2Q9UI40 661 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SNX7Q9UNH6 387 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 BOLA1Q9Y3E2 137 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CCDC162PA2VCL2 907 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 DCAF8L1A6NGE4 600 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PORP16435 677 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PRKAA2P54646 552 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CBWD2Q8IUF1 395 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 C10orf82Q8WW14 230 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ASNSD1Q9NWL6 643 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 IPO11Q9UI26 975 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 COPG1Q9Y678 874 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 IGSF9BQ9UPX0 1349 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 GSTM1P09488 218 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF182P17025 639 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 MAP2K4P45985 399 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SLC7A2P52569 658 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 UGT8Q16880 541 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PPP2R2DQ66LE6 453 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZFP1Q6P2D0 407 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CDAN1Q8IWY9 1227 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 HIPK3Q9H422 1215 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PCDHGA10Q9Y5H3 936 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CSF2P04141 144 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 HSF2Q03933 536 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RPA4Q13156 261 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TFDP2Q14188 446 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 DDR2Q16832 855 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ULK4Q96C45 1275 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF285Q96NJ3 590 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 BEX1Q9HBH7 125 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 KBTBD4Q9NVX7 518 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CNOT6Q9ULM6 557 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 DNMT3AQ9Y6K1 912 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM150BA6NC51 233 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 DFNA5O60443 496 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 IL6STP40189 918 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RELAQ04206 551 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TREML1Q86YW5 311 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 UVRAGQ9P2Y5 699 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 A8MX80 341 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 MED24O75448 989 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CPSF4O95639 269 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TP53P04637 393 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 GM2AP17900 193 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 NPEPPSP55786 919 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 STX5Q13190 355 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 USF2Q15853 346 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 EFL1Q7Z2Z2 1120 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RTL3Q8N8U3 475 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 AZIN2Q96A70 460 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 COG5Q9UP83 839 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 MAP3K15Q6ZN16 1313 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 NUDT17P0C025 328 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SUZ12Q15022 739 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CBWD6Q4V339 395 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CBWD3Q5JTY5 395 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CBWD5Q5RIA9 395 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 P3H2Q8IVL5 708 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF276Q8N554 614 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 LEMD2Q8NC56 503 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 C9orf16Q9BUW7 83 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RNF19AQ9NV58 838 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 IQCMA0A1B0GVH7 501 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 E9PAM4 449 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PDXKO00764 312 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PRPF4O43172 522 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ENDOUP21128 410 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 IDH2P48735 452 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RPL14P50914 215 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PLA2G4FQ68DD2 849 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 GTF3C4Q9UKN8 822 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 AKT3Q9Y243 479 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PCDHA3Q9Y5H8 950 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PMPCBO75439 489 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SOAT2O75908 522 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SERPINB9P50453 376 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RPS8P62241 208 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 NAB1Q13506 487 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TUBA3CQ13748 450 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PTK6Q13882 451 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 FAM83EQ2M2I3 478 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF613Q6PF04 617 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 GOLM1Q8NBJ4 401 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 HGH1Q9BTY7 390 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 MKS1Q9NXB0 559 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 KCTD5Q9NXV2 234 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 FUOMA2VDF0 154 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 GNB5O14775 395 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RBP3P10745 1247 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms