RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SPATA13Q96N96 652 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 USE1Q9NZ43 259 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MORF4L1Q9UBU8 362 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 BLOC1S6Q9UL45 172 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PRG3Q9Y2Y8 225 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 H3BRB1 525 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 LYPLA1O75608 230 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SERPINI2O75830 405 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MT-CO1P00395 513 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RFX3P48380 749 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 HIRAP54198 1017 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ACVR2BQ13705 512 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 FASTKQ14296 549 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 LRRC8BQ6P9F7 803 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 BHLHE22Q8NFJ8 381 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ZSCAN18Q8TBC5 510 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 VMP1Q96GC9 406 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TUT1Q9H6E5 874 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 LGALS13Q9UHV8 139 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TRHDEQ9UKU6 1024 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TNFSF13BQ9Y275 285 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SPACA6W5XKT8 324 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RGPD5Q99666 1765 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 DARSP14868 501 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CRABP2P29373 138 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TMEM132BQ14DG7 1078 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ISLR2Q6UXK2 745 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PIGWQ7Z7B1 504 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PIWIL2Q8TC59 973 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SPOCK2Q92563 424 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SYT15Q9BQS2 421 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 DMAC2Q9NW81 257 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CAB39Q9Y376 341 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MRPL42Q9Y6G3 142 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CLUHO75153 1309 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CASTOR2A6NHX0 329 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 B4GALT5O43286 388 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 FAM155BO75949 473 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SLC2A3P11169 496 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 RPL14P50914 215 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CDC16Q13042 620 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PLCL1Q15111 1095 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 TRIP4Q15650 581 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 TBCELQ5QJ74 424 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 ZBTB49Q6ZSB9 765 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CPNE8Q86YQ8 564 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SLC41A1Q8IVJ1 513 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 EFCAB3Q8N7B9 438 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 KCTD14Q9BQ13 255 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 ECSITQ9BQ95 431 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CDT1Q9H211 546 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SEMA6AQ9H2E6 1030 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 WRAP73Q9P2S5 460 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 EIF3LQ9Y262 564 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 C2CD2Q9Y426 696 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 HNRNPRO43390 633 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 APOA1P02647 267 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SERPINA6P08185 405 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 COX4I1P13073 169 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 MAPK9P45984 424 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PKNOX1P55347 436 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 DNAJB3Q8WWF6 145 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 OPTNQ96CV9 577 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 RPRD1AQ96P16 312 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PDGFCQ9NRA1 345 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 TMEM59LQ9UK28 342 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 BIRC5O15392 142 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 GLP2RO95838 553 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 S100A5P33763 92 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 EPHB3P54753 998 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 RIPK1Q13546 671 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SLC51AQ86UW1 340 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CENPLQ8N0S6 344 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 COPS5Q92905 334 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 FAM192AQ9GZU8 254 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 RBM22Q9NW64 420 aaKnown RBP eCLIP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 COL20A1Q9P218 1284 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 DYRK1BQ9Y463 629 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PHRF1Q9P1Y6 1649 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 A0A087X1B8 175 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 THP07101 528 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 GJB1P08034 283 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PCYT1AP49585 367 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CAMK2GQ13555 558 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 XYLT1Q86Y38 959 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PSTKQ8IV42 348 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 FAM13CQ8NE31 585 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PRPF18Q99633 342 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 RBBP8Q99708 897 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 C12orf65Q9H3J6 166 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CDHR5Q9HBB8 845 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CROTQ9UKG9 612 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SORCS3Q9UPU3 1222 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PHGDHO43175 533 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 VAPBO95292 243 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PIGNO95427 931 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CYP1A1P04798 512 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms