RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 STN1Q9H668 368 aaKnown RBP10.6□□□□□ -0.71
VPS11-207ENST00000620429 COPS7BQ9H9Q2 264 aaPredicted RBP10.6□□□□□ -0.71
VPS11-207ENST00000620429 PARVAQ9NVD7 372 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 COMMD8Q9NX08 183 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 SEPT10Q9P0V9 454 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 RALAP11233 206 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 PKLRP30613 574 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 IDUAP35475 653 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 SLC26A2P50443 739 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 MFAP3P55082 362 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 TRAF2Q12933 501 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 DGKZQ13574 1117 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 C1orf220Q5T0J3 134 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 AGAP9Q5VTM2 703 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 FAM117BQ6P1L5 589 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 SIX6OS1Q8N1H7 587 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 FAM151AQ8WW52 585 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 DLG3Q92796 817 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 CDHR1Q96JP9 859 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 RILPQ96NA2 401 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 CDK5RAP1Q96SZ6 601 aaKnown RBP10.59□□□□□ -0.71
VPS11-207ENST00000620429 WDR18Q9BV38 432 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 TMEM117Q9H0C3 514 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 STMN3Q9NZ72 180 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 HMGXB4Q9UGU5 601 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 IGLV3-22A0A075B6J6 115 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 A0A0B4J269 797 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 CCRL2O00421 344 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 POLR1CO15160 346 aaPredicted RBP10.59□□□□□ -0.71
VPS11-207ENST00000620429 GAS7O60861 476 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 BCL10O95999 233 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 KRT3P12035 628 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 ZNF182P17025 639 aaPredicted RBP10.59□□□□□ -0.71
VPS11-207ENST00000620429 CCNA2P20248 432 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 KLRC2P26717 231 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 NUDT1P36639 197 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 CDC20Q12834 499 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 TUBB3Q13509 450 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 SMU1Q2TAY7 513 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 ACAD10Q6JQN1 1059 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 GLRX5Q86SX6 157 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 ADAMTSL2Q86TH1 951 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 CCDC28AQ8IWP9 274 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.59□□□□□ -0.71
VPS11-207ENST00000620429 CHAC2Q8WUX2 184 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 SHC3Q92529 594 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 CMTM5Q96DZ9 223 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 ACAP3Q96P50 834 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 FAM111AQ96PZ2 611 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 PKP2Q99959 881 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 TMEM79Q9BSE2 394 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 WDR12Q9GZL7 423 aaKnown RBP10.59□□□□□ -0.71
VPS11-207ENST00000620429 CYP4F11Q9HBI6 524 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 WRAP73Q9P2S5 460 aaPredicted RBP10.59□□□□□ -0.71
VPS11-207ENST00000620429 HACL1Q9UJ83 578 aa10.59□□□□□ -0.71
VPS11-207ENST00000620429 GOLGA8IPA6NC78 632 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 GOLGA8JA6NMD2 632 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 H7C0C1 242 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 FZD9O00144 591 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TAF4O00268 1085 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 ATP2A1O14983 1001 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 KCNJ13O60928 360 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 GPC4O75487 556 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 EGFRP00533 1210 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 CALCAP01258 141 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 NCAM1P13591 858 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 KRT5P13647 590 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 GRK2P25098 689 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 L1CAMP32004 1257 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 GJC1P36383 396 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TMBIM6P55061 237 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 FAAP100Q0VG06 881 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 BST1Q10588 318 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 RAB39AQ14964 217 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 FASTKD3Q14CZ7 662 aaKnown RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 KLHL38Q2WGJ6 581 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 PLEKHG7Q6ZR37 379 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 LINC00299Q6ZSB3 139 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TMEM26Q6ZUK4 368 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 DENND5BQ6ZUT9 1274 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 GPC2Q8N158 579 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TTC30BQ8N4P2 665 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 LINC00469Q8N7U9 141 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 ASCC1Q8N9N2 400 aaKnown RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 XXYLT1Q8NBI6 393 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 ELMO3Q96BJ8 720 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TUBA1CQ9BQE3 449 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 HMG20AQ9NP66 347 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TMX2Q9Y320 296 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 DNALI1O14645 258 aaPredicted RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 NOL3O60936 208 aaKnown RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 PSMD10O75832 226 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 CYP3A4P08684 503 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 EPHA3P29320 983 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms