RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 C1QBPQ07021 282 aaKnown RBP9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 APOFQ13790 326 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 OTUD3Q5T2D3 398 aaPredicted RBP9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 MAVSQ7Z434 540 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 LPGAT1Q92604 370 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 PGLYRP2Q96PD5 576 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 HIPK3Q9H422 1215 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 CAB39LQ9H9S4 337 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 VPS45Q9NRW7 570 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 RIMS3Q9UJD0 308 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 CROTQ9UKG9 612 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 PRR12Q9ULL5 1215 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC8A2Q9UPR5 921 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 CORINQ9Y5Q5 1042 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 LAMB2P55268 1798 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 PRPSAP2O60256 369 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 SNNO75324 88 aaPredicted RBP9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 MYO1DO94832 1006 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 HDCP19113 662 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 CCNA2P20248 432 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 ADORA2AP29274 412 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 MIPP30301 263 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 GABRB2P47870 512 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 GEN1Q17RS7 908 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZBED5Q49AG3 693 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 SEL1L3Q68CR1 1132 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 MBLAC2Q68D91 279 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 RSBN1LQ6PCB5 846 aaPredicted RBP9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 DRICH1Q6PGQ1 229 aaPredicted RBP9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 TMC5Q6UXY8 1006 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 C15orf52Q6ZUT6 534 aaKnown RBP9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 BBS12Q6ZW61 710 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 FIBCD1Q8N539 461 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 KCNH7Q9NS40 1196 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 RBAKQ9NYW8 714 aaPredicted RBP9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 PAK5Q9P286 719 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 SQORQ9Y6N5 450 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 CACNA1SQ13698 1873 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 IRS2Q9Y4H2 1338 aa9.98□□□□□ -0.81
TNFAIP3-210ENST00000620204 KRBA1A5PL33 1030 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 NRP1O14786 923 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PABPC1P11940 636 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 CASP2P42575 452 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 SERPINB9P50453 376 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 NAGLUP54802 743 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PMS2P3Q13401 168 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 MYBPC2Q14324 1141 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 DLG2Q15700 870 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 KCNJ8Q15842 424 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 LSM12Q3MHD2 195 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 FAM102AQ5T9C2 384 aaPredicted RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 GK5Q6ZS86 529 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 KBTBD7Q8WVZ9 684 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 HTRA1Q92743 480 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF668Q96K58 619 aaPredicted RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 BIRC8Q96P09 236 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 MXRA8Q9BRK3 442 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 TPK1Q9H3S4 243 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 XPNPEP3Q9NQH7 507 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 DDX28Q9NUL7 540 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 EGFL7Q9UHF1 273 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PPME1Q9Y570 386 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 IGLV3-22A0A075B6J6 115 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 KCNU1A8MYU2 1149 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 MAN1A2O60476 641 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 LRCH4O75427 683 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PIGNO95427 931 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 MMP8P22894 467 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 NLRP11P59045 1033 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 ARPC4P59998 168 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF252P-AS1Q0IIN9 211 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 SF3B4Q15427 424 aaKnown RBP eCLIP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 TDRD10Q5VZ19 366 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 OR6B2Q6IFH4 312 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 HHIPL2Q6UWX4 724 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 KCTD8Q6ZWB6 473 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 CCNYQ8ND76 341 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 STARD8Q92502 1023 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF516Q92618 1163 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC39A3Q9BRY0 314 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 OLAHQ9NV23 265 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 COPG2Q9UBF2 871 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 LRP5O75197 1615 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 GAKO14976 1311 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 SYNJ2BP-COX16A0A087WUM0 186 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 APOC4-APOC2K7ER74 178 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 APOC2P02655 101 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 CYP2C9P11712 490 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 AVPR1AP37288 418 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PSME3P61289 254 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PFKPQ01813 784 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC10A2Q12908 348 aaPredicted RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 DGKDQ16760 1214 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 NIPAL1Q6NVV3 410 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 BORAQ6PGQ7 559 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC4A11Q8NBS3 891 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 MAGEE2Q8TD90 523 aaPredicted RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC16A10Q8TF71 515 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PBXIP1Q96AQ6 731 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms