RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 DNAJB1P25685 340 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 SCNN1AP37088 669 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 CSE1LP55060 971 aaKnown RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 SNX16P57768 344 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 NSUN2Q08J23 767 aaKnown RBP eCLIP15.91■□□□□ 0.14
GPN1-212ENST00000616939 GK3PQ14409 553 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 SEL1L3Q68CR1 1132 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 SNRNP48Q6IEG0 339 aaKnown RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 CASC4Q6P4E1 433 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 Q6ZNX1 250 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 AMIGO2Q86SJ2 522 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 UBA3Q8TBC4 463 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 JDP2Q8WYK2 163 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 RCN3Q96D15 328 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 PIWIL1Q96J94 861 aaKnown RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 GJD4Q96KN9 370 aaPredicted RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 HEXIM2Q96MH2 286 aaKnown RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 UHRF1Q96T88 793 aaPredicted RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 GATA5Q9BWX5 397 aaPredicted RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 OXCT2Q9BYC2 517 aaPredicted RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 DRC3Q9H069 523 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 EFCAB1Q9HAE3 211 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 PNPLA3Q9NST1 481 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 OXSMQ9NWU1 459 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 TUBA8Q9NY65 449 aaPredicted RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 HESX1Q9UBX0 185 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 G3BP2Q9UN86 482 aaKnown RBP15.91■□□□□ 0.14
GPN1-212ENST00000616939 ANKRD6Q9Y2G4 727 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 RNF11Q9Y3C5 154 aa15.91■□□□□ 0.14
GPN1-212ENST00000616939 A0A0G2JMZ2 1700 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 LRRC37A2A6NM11 1700 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 H3BNH8 94 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 H6PDO95479 791 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 KRT19P08727 400 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 SERPINB5P36952 375 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 HADHAP40939 763 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 RPL14P50914 215 aaKnown RBP15.9■□□□□ 0.14
GPN1-212ENST00000616939 GALK1P51570 392 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 NUP107P57740 925 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 MS4A2Q01362 244 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 LAMTOR4Q0VGL1 99 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 PRKAA1Q13131 559 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 ORC1Q13415 861 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 PPP2R5DQ14738 602 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 LSM12Q3MHD2 195 aaKnown RBP15.9■□□□□ 0.14
GPN1-212ENST00000616939 MGAT5BQ3V5L5 792 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 ATF7IP2Q5U623 682 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 POTEHQ6S545 545 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 CENPIQ92674 756 aaPredicted RBP15.9■□□□□ 0.14
GPN1-212ENST00000616939 KHSRPQ92945 711 aaKnown RBP eCLIP15.9■□□□□ 0.14
GPN1-212ENST00000616939 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 CCT7Q99832 543 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 C11orf84Q9BUA3 381 aaPredicted RBP15.9■□□□□ 0.14
GPN1-212ENST00000616939 FZD8Q9H461 694 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 ACAD9Q9H845 621 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 MAN1C1Q9NR34 630 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 VPS45Q9NRW7 570 aa15.9■□□□□ 0.14
GPN1-212ENST00000616939 FNDC1Q4ZHG4 1894 aaPredicted RBP15.9■□□□□ 0.14
GPN1-212ENST00000616939 IGKV6-21A0A0C4DH24 114 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 SH3PXD2BA1X283 911 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 TTC36A6NLP5 189 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 HSPA1AP0DMV8 641 aaKnown RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 HSPA1BP0DMV9 641 aaKnown RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 TPP2P29144 1249 aaPredicted RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 TCF7P36402 384 aaPredicted RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 ACADVLP49748 655 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 CSRP3P50461 194 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 STXBP2Q15833 593 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 PKDCCQ504Y2 493 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 KLHL35Q6PF15 583 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 ZYG11AQ6WRX3 759 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 TMEM110Q86TL2 294 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 COLGALT1Q8NBJ5 622 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 FLAD1Q8NFF5 587 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 CEP70Q8NHQ1 597 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 RIN3Q8TB24 985 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 ASB9Q96DX5 294 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 KLHL32Q96NJ5 620 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 NUF2Q9BZD4 464 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 ZBTB26Q9HCK0 441 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 SYBUQ9NX95 663 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 DTLQ9NZJ0 730 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 IGSF9Q9P2J2 1179 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 EPS15L1Q9UBC2 864 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 IPO11Q9UI26 975 aaKnown RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 TSPAN16Q9UKR8 245 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 ZNF214Q9UL59 606 aaPredicted RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 TNFSF13BQ9Y275 285 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 USP3Q9Y6I4 520 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 GRID2O43424 1007 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 RNASEH2AO75792 299 aaKnown RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 VAPBO95292 243 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 GLUD2P49448 558 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 TRAP1Q12931 704 aaKnown RBP15.89■□□□□ 0.13
GPN1-212ENST00000616939 PPM1LQ5SGD2 360 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 LIPMQ5VYY2 423 aa15.89■□□□□ 0.13
GPN1-212ENST00000616939 PLD6Q8N2A8 252 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms