RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 PTPRHQ9HD43 1115 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.61□□□□□ -0.39
HLCS-207ENST00000612277 KDM4BO94953 1096 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 TDP2O95551 362 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 CRABP2P29373 138 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 S100A3P33764 101 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ENPEPQ07075 957 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 PDIA5Q14554 519 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ZNF621Q6ZSS3 439 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 TCP10LQ8TDR4 215 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ZNF75CPQ92670 426 aaPredicted RBP12.61□□□□□ -0.39
HLCS-207ENST00000612277 TMEM47Q9BQJ4 181 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 TRIM9Q9C026 710 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 THAP2Q9H0W7 228 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 KIF28PB7ZC32 967 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 DCXO43602 365 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ACOT2P49753 483 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 CDK9P50750 372 aaKnown RBP12.61□□□□□ -0.39
HLCS-207ENST00000612277 INTS11Q5TA45 600 aaKnown RBP12.61□□□□□ -0.39
HLCS-207ENST00000612277 HLA-DQA1Q5Y7H0 255 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 NT5DC3Q86UY8 548 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 RNF149Q8NC42 400 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 PHF21BQ96EK2 531 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ASB2Q96Q27 587 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 NOTOA8MTQ0 251 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 CDH4P55283 916 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 PPP2R2BQ00005 443 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 ZBTB6Q15916 424 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 ELOA2Q8IYF1 753 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 FBXO39Q8N4B4 442 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 HPF1Q9NWY4 346 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 HOXC10Q9NYD6 342 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 CYP2C8P10632 490 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 ITGA2P17301 1181 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 ABL2P42684 1182 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 ARFIP1P53367 373 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 CLEC17AQ6ZS10 378 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 MED8Q96G25 268 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 CCDC3Q9BQI4 270 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 PIN4Q9Y237 131 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 TCOF1Q13428 1488 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 MED22Q15528 200 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 TMED8Q6PL24 325 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 RAB11FIP2Q7L804 512 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 DCP1BQ8IZD4 617 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 PARP8Q8N3A8 854 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 PTCD3Q96EY7 689 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 NMRAL1Q9HBL8 299 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 GTF3C4Q9UKN8 822 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 WDR37Q9Y2I8 494 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 FAM153BP0C7A2 387 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 CLUP10909 449 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 MNDAP41218 407 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 GRIA3P42263 894 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 PTPN5P54829 565 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 CDKL1Q00532 357 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 RABL6Q3YEC7 729 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 FAM171BQ6P995 826 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 FAM136AQ96C01 138 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 EMILIN2Q9BXX0 1053 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 VPS45Q9NRW7 570 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 MED11Q9P086 117 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 RGS17Q9UGC6 210 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 TADA2AO75478 443 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 UGT2B15P54855 530 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 PHC1P78364 1004 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.6□□□□□ -0.39
HLCS-207ENST00000612277 DNAJC14Q6Y2X3 702 aaPredicted RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 DEF8Q6ZN54 512 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 RBM43Q6ZSC3 357 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 YTHDF3Q7Z739 585 aaKnown RBP12.6□□□□□ -0.39
HLCS-207ENST00000612277 SPERTQ8NA61 448 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 TOR3AQ9H497 397 aa12.6□□□□□ -0.39
HLCS-207ENST00000612277 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
HLCS-207ENST00000612277 PRAMEF33A0A0G2JMD5 474 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 PRAMEF10O60809 474 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
HLCS-207ENST00000612277 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 PHACTR4Q8IZ21 702 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 LEMD2Q8NC56 503 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 SEMA4DQ92854 862 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 NLNQ9BYT8 704 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 DCLK3Q9C098 648 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 POMKQ9H5K3 350 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 ATP10BO94823 1461 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 IFNA16P05015 189 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 SLC2A3P11169 496 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 SMIM11AP58511 58 aa12.59□□□□□ -0.39
HLCS-207ENST00000612277 STARD3Q14849 445 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms