RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TPP1O14773 563 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TUBP50607 506 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 FBXO33Q7Z6M2 555 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 IFNLR1Q8IU57 520 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 FAM20CQ8IXL6 584 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 A0A087X1B8 175 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 POMCP01189 267 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 COQ6Q9Y2Z9 468 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ABCC3O15438 1527 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 VAPBO95292 243 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 CETPP11597 493 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 CCNA2P20248 432 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 PLEKHG4BQ96PX9 1271 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 NINJ2Q9NZG7 142 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 AHCYL1O43865 530 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 SAMD4BQ5PRF9 694 aaKnown RBP13.3□□□□□ -0.28
USP6NL-205ENST00000609104 ADHFE1Q8IWW8 467 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 HTR3CQ8WXA8 447 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 COG5Q9UP83 839 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 CSF1RP07333 972 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 CDK16Q00536 496 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 TMEM159Q96B96 161 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 PXDNLA1KZ92 1463 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 RCVRNP35243 200 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 CDH17Q12864 832 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 PYDC2Q56P42 97 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF470Q6ECI4 717 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 PGLYRP2Q96PD5 576 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 SENP6Q9GZR1 1112 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-205ENST00000609104 KBTBD4Q9NVX7 518 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-205ENST00000609104 RAMP2O60895 175 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 VPS4BO75351 444 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
USP6NL-205ENST00000609104 SREBF1P36956 1147 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 MZT2BQ6NZ67 158 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 RNF44Q7L0R7 432 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 PCDH20Q8N6Y1 951 aaKnown RBP13.3□□□□□ -0.28
USP6NL-205ENST00000609104 FAM192AQ9GZU8 254 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 CCDC130P13994 396 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 AKAP5P24588 427 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 POLD2P49005 469 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 CDH8P55286 799 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 LSM3P62310 102 aaKnown RBP13.3□□□□□ -0.28
USP6NL-205ENST00000609104 SPACA7Q96KW9 195 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 OR56A5P0C7T3 313 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 SAMD7Q7Z3H4 446 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 C8orf59Q8N0T1 100 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-205ENST00000609104 STK32AQ8WU08 396 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF232Q9UNY5 417 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 SHOC2Q9UQ13 582 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 KIF20BQ96Q89 1820 aa13.3□□□□□ -0.28
USP6NL-205ENST00000609104 ALDH2P05091 517 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 RARAP10276 462 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 TYMPP19971 482 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 FAM50BQ9Y247 325 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 CRB1P82279 1406 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 CCDC182A6NF36 153 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 FAM86B1E9PN63 330 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 TBX4P57082 545 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 LGALS3BPQ08380 585 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 Q4G0T1 1027 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 UBA2Q9UBT2 640 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-205ENST00000609104 RENBPP51606 427 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-205ENST00000609104 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
USP6NL-205ENST00000609104 LRRN4CLQ8ND94 238 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 CYP3A43Q9HB55 503 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 SH3GLB1Q9Y371 365 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 A0A087WZ62 844 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 H3BMM5 538 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 S100A3P33764 101 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 ATG14Q6ZNE5 492 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 ARHGEF19Q8IW93 802 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-205ENST00000609104 SAR1AQ9NR31 198 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 MYL4P12829 197 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF7P17097 686 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-205ENST00000609104 GMPSP49915 693 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-205ENST00000609104 FIGNQ5HY92 759 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 DET1Q7L5Y6 550 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 PEG10Q86TG7 708 aaKnown RBP13.29□□□□□ -0.28
USP6NL-205ENST00000609104 PACS2Q86VP3 889 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 SLC9A7Q96T83 725 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 CATSPERZQ9NTU4 200 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 NDOR1Q9UHB4 597 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 IDH3BO43837 385 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 CRATP43155 626 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 CCR4P51679 360 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 PRKAG1P54619 331 aa13.29□□□□□ -0.28
USP6NL-205ENST00000609104 OR7A2PQ8NGA2 310 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms