RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CRACR2AQ9BSW2 395 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 FZD4Q9ULV1 537 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 PLXNA2O75051 1894 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 SYNJ2BP-COX16A0A087WUM0 186 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 TRABD2BA6NFA1 517 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 BECN2A8MW95 431 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 WNT9AO14904 365 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 FGFR1OPO95684 399 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 IL1BP01584 269 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 VAV1P15498 845 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 PDGFRAP16234 1089 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 SLC9A1P19634 815 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 C5AR1P21730 350 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 CD38P28907 300 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 USP8P40818 1118 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 CCR5P51681 352 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 CDK17Q00537 523 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 SLC12A1Q13621 1099 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 ARHGAP44Q17R89 818 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 ENOSF1Q7L5Y1 443 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 CIR1Q86X95 450 aaPredicted RBP13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 GATAD2AQ86YP4 633 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 GALNT15Q8N3T1 639 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 RNF34Q969K3 372 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 ELF4Q99607 663 aaPredicted RBP13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 PRMT1Q99873 361 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 AASDHPPTQ9NRN7 309 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 COX16Q9P0S2 106 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 GPSM3Q9Y4H4 160 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 ADAMTS20P59510 1910 aa13.81□□□□□ -0.2
POLR2J3-219ENST00000608621 ATRXP46100 2492 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3DA0A087WVF3 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3IA0A087WXS9 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3EA0A087X179 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3KA0A087X1G2 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 FAM149AA5PLN7 773 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3FA6NER0 549 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 C10orf142B7Z368 130 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3LB9A6J9 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 ADH1BP00325 375 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3HP0C7X1 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 ABCB4P21439 1286 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 PLK1P53350 603 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 APBA1Q02410 837 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 SULT2A1Q06520 285 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 PDCLQ13371 301 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 COL9A2Q14055 689 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 EFHC1Q5JVL4 640 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3GQ6DHY5 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3CQ6IPX1 549 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 FBXL22Q6P050 247 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TRIM65Q6PJ69 517 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 TBC1D3Q8IZP1 549 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 CPXM1Q96SM3 734 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 FAM204AQ9H8W3 233 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 DDIT4Q9NX09 232 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 FTSJ1Q9UET6 329 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 RAXQ9Y2V3 346 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
POLR2J3-219ENST00000608621 KNTC1P50748 2209 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 ACACAQ13085 2346 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 A0A1B0GVM2 712 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 A0A1W2PR77 199 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 TCAF2A6NFQ2 919 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 PLK4O00444 970 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 GRAP2O75791 330 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 ITGAVP06756 1048 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 GLI1P08151 1106 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 SLC2A3P11169 496 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 CCR1P32246 355 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 DRD3P35462 400 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 ADPRHP54922 357 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 CYP4F3Q08477 520 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 CAMK2BQ13554 666 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 SHBQ15464 509 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 COL28A1Q2UY09 1125 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 INAVAQ3KP66 663 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 ACCSLQ4AC99 568 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 RABGAP1LQ5R372 815 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 OR6B2Q6IFH4 312 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 DHRS13Q6UX07 377 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 GBP6Q6ZN66 633 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 FRS2Q8WU20 508 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 HNRNPLLQ8WVV9 542 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 ALG14Q96F25 216 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 SERAC1Q96JX3 654 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 FAM81BQ96LP2 452 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 URB1O60287 2271 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-219ENST00000608621 APC2O95996 2303 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 TLR4O00206 839 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 CBX4O00257 560 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 ENC1O14682 589 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 LDOC1O95751 146 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 METAP1P53582 386 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 OXCT1P55809 520 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 BNIP3Q12983 259 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 AUHQ13825 339 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms