RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ATP6V0D2Q8N8Y2 350 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 BANPQ8N9N5 519 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCNH5Q8NCM2 988 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PDPRQ8NCN5 879 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMEM52Q8NDY8 209 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ACTRT2Q8TDY3 377 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GDPD5Q8WTR4 605 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CHAC2Q8WUX2 184 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 APBB2Q92870 758 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 DNAJC19Q96DA6 116 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 C18orf8Q96DM3 657 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMA16Q96EY4 203 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 OXNAD1Q96HP4 312 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PLEKHA8Q96JA3 519 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 DNAJC1Q96KC8 554 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCDC138Q96M89 665 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZDHHC15Q96MV8 337 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 C7orf26Q96N11 449 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PTCHD1Q96NR3 888 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MTMR9Q96QG7 549 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FERD3LQ96RJ6 166 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SRPK1Q96SB4 655 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC9A7Q96T83 725 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TTC1Q99614 292 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 DHRS4Q9BTZ2 278 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ISCA1Q9BUE6 129 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCDC106Q9BWC9 280 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 OSBPL10Q9BXB5 764 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 DRC3Q9H069 523 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 NOL6Q9H6R4 1146 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MANSC1Q9H8J5 431 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MOV10Q9HCE1 1003 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SIX2Q9NPC8 291 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC38A7Q9NVC3 462 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 DDX18Q9NVP1 670 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GID8Q9NWU2 228 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SELENONQ9NZV5 590 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMEM9Q9P0T7 183 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 EPS15L1Q9UBC2 864 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 BCAP29Q9UHQ4 241 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ANAPC5Q9UJX4 755 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ITGA11Q9UKX5 1188 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GRID1Q9ULK0 1009 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PCDHA6Q9UN73 950 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SATB2Q9UPW6 733 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ERVK-11Q9UQG0 969 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PCDHA8Q9Y5H6 950 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 HEY1Q9Y5J3 304 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PSME4Q14997 1843 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 NUP188Q5SRE5 1749 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARAP2Q8WZ64 1704 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TNKSO95271 1327 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SPATA31A1Q5TZJ5 1347 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM205AQ6ZU69 1335 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 COL1A1P02452 1464 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PXDNQ92626 1479 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 BAZ2BQ9UIF8 2168 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RICTORQ6R327 1708 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 hCG_2014768A0A024R1R8 64 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCDC194A0A1B0GVG4 234 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ESYT2A0FGR8 921 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DYTNA2CJ06 578 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PRAMEF22A3QJZ6 481 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TBKBP1A7MCY6 615 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ANKRD63C9JTQ0 380 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 KPNA4O00629 521 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PDXKO00764 312 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC16A3O15427 465 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 AQP9O43315 295 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DKC1O60832 514 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 GCATO75600 419 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 H6PDO95479 791 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 BAG2O95816 211 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 FUCA1P04066 466 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TP53P04637 393 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ASGR2P07307 311 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SERPINA6P08185 405 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ALOX5P09917 674 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC5A1P13866 664 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CHRNB2P17787 502 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT15P19012 456 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT4P19013 534 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC9A1P19634 815 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TNFAIP3P21580 790 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 FGFR2P21802 821 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADSSP30520 456 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADORA1P30542 326 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RPA3P35244 121 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CHKAP35790 457 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC1A1P43005 524 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ETV4P43268 484 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ALDH1A3P47895 512 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ENTPD1P49961 510 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DNA2P51530 1060 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 HSD17B4P51659 736 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ITGA8P53708 1063 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CSE1LP55060 971 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 AQP4P55087 323 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARL4CP56559 192 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 C21orf59P57076 290 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms