RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 MATN2O00339 956 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 SPTLC1O15269 473 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 UQCRBP14927 111 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 RNF43Q68DV7 783 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CBWD2Q8IUF1 395 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MED8Q96G25 268 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 KATNAL1Q9BW62 490 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MAPKAPK2P49137 400 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CBWD1Q9BRT8 395 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CLK4Q9HAZ1 481 aaKnown RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 PFDN2Q9UHV9 154 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 TIMM44O43615 452 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CNPP09543 421 aaKnown RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 AKAP5P24588 427 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 B3GALNT2Q8NCR0 500 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MAGEC3Q8TD91 643 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ACTRT1Q8TDG2 376 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ACAT2Q9BWD1 397 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 PDGFCQ9NRA1 345 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MRASO14807 208 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 AZGP1P25311 298 aaKnown RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 TAF1CQ15572 869 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 SLC45A4Q5BKX6 768 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 C4orf22Q6V702 233 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MTMR8Q96EF0 704 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 FUCA2Q9BTY2 467 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ALDH1A2O94788 518 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ALDH4A1P30038 563 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MTX3Q5HYI7 312 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 FAM172AQ8WUF8 416 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 NT5MQ9NPB1 228 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 UBP1Q9NZI7 540 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 TMCC3Q9ULS5 477 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 GNB5O14775 395 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MAPK1P28482 360 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 SBK1Q52WX2 424 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 GALNT15Q8N3T1 639 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF285Q96NJ3 590 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 WDR41Q9HAD4 459 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 TUBGCP4Q9UGJ1 667 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MYL12BO14950 172 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 THPOP40225 353 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MRNIPQ6NTE8 343 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 NCCRP1Q6ZVX7 275 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF614Q8N883 585 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CLPBQ9H078 707 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 RGS17Q9UGC6 210 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ERI2A8K979 691 aaKnown RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 GAS2O43903 313 aaKnown RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 LYNP07948 512 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CPA3P15088 417 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CAMK2GQ13555 558 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 TDRD10Q5VZ19 366 aaKnown RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 HMBOX1Q6NT76 420 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 SETD9Q8NE22 299 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 DQX1Q8TE96 717 aaKnown RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ART5Q96L15 291 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 UBA2Q9UBT2 640 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF70Q9UC06 446 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 PRKAR1AP10644 381 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 TCF7P36402 384 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CEBPGP53567 150 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF177Q13360 481 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-216ENST00000602557 PRMT9Q6P2P2 845 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 MCFD2Q8NI22 146 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 HSPBAP1Q96EW2 488 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 CLPTM1LQ96KA5 538 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 RMND5AQ9H871 391 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 ZFYVE28Q9HCC9 887 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 SNX3O60493 162 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 KHDRBS3O75525 346 aaKnown RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ENDOD1O94919 500 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ALADP13716 330 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 DLG4P78352 724 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 TMEM53Q6P2H8 277 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 GPRC5AQ8NFJ5 357 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 KBTBD8Q8NFY9 601 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ARL8BQ9NVJ2 186 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 VANGL2Q9ULK5 521 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 C2orf71A6NGG8 1288 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 MAGEA2P43356 314 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 SPIRE1Q08AE8 756 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CA9Q16790 459 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 LIN52Q52LA3 116 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 OLFML2AQ68BL7 652 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CYP4V2Q6ZWL3 525 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 PCDH20Q8N6Y1 951 aaKnown RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ENGASEQ8NFI3 743 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 FICDQ9BVA6 458 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 MCUBQ9NWR8 336 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CROTQ9UKG9 612 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 DIP2AQ14689 1571 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 PPLO60437 1756 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 NR4A1P22736 598 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 GRIA3P42263 894 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms