RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 PDZD8Q8NEN9 1154 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 RTP4Q96DX8 246 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 MSANTD3Q96H12 275 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 TRIM51Q9BSJ1 452 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 FOXQ1Q9C009 403 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 BRD8Q9H0E9 1235 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 DHX35Q9H5Z1 703 aaKnown RBP11.88□□□□□ -0.51
ZNF548-211ENST00000600927 WDCPQ9H6R7 721 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 MED4Q9NPJ6 270 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 DONSONQ9NYP3 566 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 TRPM5Q9NZQ8 1165 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 DNPEPQ9ULA0 475 aa11.88□□□□□ -0.51
ZNF548-211ENST00000600927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ESYT3A0FGR9 886 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ZSCAN5CA6NGD5 496 aaPredicted RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 NCAM2O15394 837 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 RRP9O43818 475 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 PPFIA2O75334 1257 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 SASH3O75995 380 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CD48P09326 243 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 RBP3P10745 1247 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 TFE3P19532 575 aaPredicted RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 TARSP26639 723 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 RPL21P46778 160 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 KPNA1P52294 538 aaPredicted RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 EIF3EP60228 445 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 SEMA3BQ13214 749 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 SNX1Q13596 522 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ZC3H12AQ5D1E8 599 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 LRIG3Q6UXM1 1119 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 GSTA5Q7RTV2 222 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CROCCP2Q86T23 111 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 RELL1Q8IUW5 271 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 IQCKQ8N0W5 287 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 KRT222Q8N1A0 295 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 PQLC3Q8N755 202 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ARL14EPQ8N8R7 260 aaPredicted RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 PCDH19Q8TAB3 1148 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 RNF139Q8WU17 664 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ATG4AQ8WYN0 398 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 FBXO32Q969P5 355 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CLDN23Q96B33 292 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CHFRQ96EP1 664 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ZFYVE19Q96K21 471 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ZFRQ96KR1 1074 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 C1orf74Q96LT6 269 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CCDC114Q96M63 670 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 SERPINB11Q96P15 392 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CSPG4P5Q96PW8 444 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CYP2S1Q96SQ9 504 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 FERMT1Q9BQL6 677 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ADAM33Q9BZ11 813 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 TXLNGYQ9BZA5 131 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 RETREG1Q9H6L5 497 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 TRPC7Q9HCX4 862 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 HPS4Q9NQG7 708 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 TLR8Q9NR97 1041 aaKnown RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 PIGVQ9NUD9 493 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 KLHL11Q9NVR0 708 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ARHGEF38Q9NXL2 777 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 HPCAL4Q9UM19 191 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 SNX24Q9Y343 169 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 MTF2Q9Y483 593 aaPredicted RBP11.87□□□□□ -0.51
ZNF548-211ENST00000600927 PIAS3Q9Y6X2 628 aa11.87□□□□□ -0.51
ZNF548-211ENST00000600927 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 IRAK2O43187 625 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 CKMP06732 381 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 RARGP13631 454 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 CCR1P32246 355 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 PLA2G5P39877 138 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 ADCY8P40145 1251 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 RPS9P46781 194 aaKnown RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 PGFP49763 221 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 PTPN5P54829 565 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 EIF3BP55884 814 aaKnown RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 NHLH1Q02575 133 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 ZNF33AQ06730 810 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 PAFAH1B3Q15102 231 aaKnown RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 CA9Q16790 459 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 RAB6CQ53S08 254 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 RHBDF2Q6PJF5 856 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 ZDHHC24Q6UX98 284 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 SCD5Q86SK9 330 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 TADA2BQ86TJ2 420 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 HOOK3Q86VS8 718 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 FAM131BQ86XD5 332 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 YAF2Q8IY57 180 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 CCDC185Q8N715 623 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 FBXO25Q8TCJ0 367 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 DQX1Q8TE96 717 aaKnown RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 NDRG1Q92597 394 aaKnown RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 KCTD15Q96SI1 283 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 EPAS1Q99814 870 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 FRMD8Q9BZ67 464 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 RNF38Q9H0F5 515 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 RAB6CQ9H0N0 254 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms