RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CWC15Q9P013 229 aaKnown RBP14.13□□□□□ -0.15
VRK3-219ENST00000600137 TRIM10Q9UDY6 481 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 LCMT1Q9UIC8 334 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 ALG6Q9Y672 507 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 MUC6Q6W4X9 2439 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 A0A0D9SEW6 157 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 TYW5A2RUC4 315 aaKnown RBP14.12□□□□□ -0.15
VRK3-219ENST00000600137 TMEM110-MUSTN1A8MSY1 372 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 K7ESF4 209 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
VRK3-219ENST00000600137 CREB3O43889 395 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 PAPSS2O95340 614 aaPredicted RBP14.12□□□□□ -0.15
VRK3-219ENST00000600137 CD48P09326 243 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 GOT1P17174 413 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 DESP17661 470 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 CTSOP43234 321 aaPredicted RBP14.12□□□□□ -0.15
VRK3-219ENST00000600137 NUBP1P53384 320 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 KRT83P78385 493 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 CDH18Q13634 790 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 DPYSQ14117 519 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 DMC1Q14565 340 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 SYT13Q7L8C5 426 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 AHI1Q8N157 1196 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 CCDC33Q8N5R6 958 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 ZNF513Q8N8E2 541 aaPredicted RBP14.12□□□□□ -0.15
VRK3-219ENST00000600137 LRRC57Q8N9N7 239 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 TXNDC5Q8NBS9 432 aaKnown RBP14.12□□□□□ -0.15
VRK3-219ENST00000600137 GABRG3Q99928 467 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 TMEM245Q9H330 911 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 PCDH18Q9HCL0 1135 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 PRMT8Q9NR22 394 aaPredicted RBP14.12□□□□□ -0.15
VRK3-219ENST00000600137 MMP17Q9ULZ9 603 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 HYOU1Q9Y4L1 999 aa14.12□□□□□ -0.15
VRK3-219ENST00000600137 A0A1W2PQF6 199 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 BUB1O43683 1085 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 ZMPSTE24O75844 475 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 KLF8O95600 359 aaPredicted RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 CD160O95971 181 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 COL9A1P20849 921 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 COMTP21964 271 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 EPHB2P29323 1055 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 OR1E1P30953 314 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 HTR7P34969 479 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 IL12RB1P42701 662 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 NOP2P46087 812 aaKnown RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 NUMBP49757 651 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 CKAP5Q14008 2032 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 ZNF234Q14588 700 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 HSF5Q4G112 596 aaPredicted RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 RNF219Q5W0B1 726 aaPredicted RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 RWDD4Q6NW29 188 aaKnown RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 NUDT18Q6ZVK8 323 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 UMODL1-AS1Q8N2C9 162 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 RTL3Q8N8U3 475 aaKnown RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 PRSS33Q8NF86 280 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 OR7D4Q8NG98 312 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 CYB5D2Q8WUJ1 264 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 NELL1Q92832 810 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 EPAS1Q99814 870 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 ACE2Q9BYF1 805 aaPredicted RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 LUC7LQ9NQ29 371 aaKnown RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 ETNK2Q9NVF9 386 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 SPATA6Q9NWH7 488 aaPredicted RBP14.11□□□□□ -0.15
VRK3-219ENST00000600137 CACNA2D2Q9NY47 1150 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 SLCO3A1Q9UIG8 710 aa14.11□□□□□ -0.15
VRK3-219ENST00000600137 DMDP11532 3685 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 C3orf70A6NLC5 250 aaPredicted RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 EEF2KO00418 725 aaKnown RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 DCLK1O15075 740 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ATG13O75143 517 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 IPO7O95373 1038 aaKnown RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 DLDP09622 509 aaKnown RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 C7P10643 843 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ERCC2P18074 760 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 POLR2EP19388 210 aaKnown RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 GLDCP23378 1020 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 NTSR1P30989 418 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ACVRL1P37023 503 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 WASP42768 502 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 SLC1A1P43005 524 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 CXCL12P48061 93 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 MAPKAPK2P49137 400 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 VASPP50552 380 aaPredicted RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 TCF15Q12870 199 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 MMRN1Q13201 1228 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 CRY1Q16526 586 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 HADHQ16836 314 aaKnown RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 PPP6R3Q5H9R7 873 aaPredicted RBP14.1□□□□□ -0.15
VRK3-219ENST00000600137 LRRC38Q5VT99 294 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 AFMIDQ63HM1 303 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 C11orf63Q6NUN7 778 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ZNF783Q6ZMS7 281 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ZNF662Q6ZS27 426 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 RFX8Q6ZV50 586 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ARHGAP12Q8IWW6 846 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 CCDC26Q8TAB7 109 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 RAPGEF5Q92565 580 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 HSPH1Q92598 858 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ZNF830Q96NB3 372 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms