RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	NATD1	Q8N6N6	113 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	URGCP	Q8TCY9	931 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ARMC5	Q96C12	935 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM169	Q96HH4	297 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DNAJC1	Q96KC8	554 aa	Known RBP	11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NUDCD1	Q96RS6	583 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM121	Q9BTD3	319 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FZD8	Q9H461	694 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	STRIP2	Q9ULQ0	834 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TNFSF13B	Q9Y275	285 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FOXO6	A8MYZ6	492 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IL18RAP	O95256	599 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SPATA31D3	P0C874	917 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	OLR1	P78380	273 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PIGH	Q14442	188 aa	Predicted RBP	11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FAM182A	Q5T1J6	154 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SYCP2L	Q5T4T6	812 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SHQ1	Q6PI26	577 aa	Known RBP	11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.58	□□□□□ -0.55	6e-16	■■■■■ 30.3
SUPT5H-216	ENST00000599335	SPATA31D4	Q6ZUB0	917 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KATNAL2	Q8IYT4	538 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	JOSD2	Q8TAC2	188 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GIPC3	Q8TF64	312 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RSAD2	Q8WXG1	361 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HERVK_113	Q902F9	699 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	POLM	Q9NP87	494 aa	Predicted RBP	11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	WHRN	Q9P202	907 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SNX9	Q9Y5X1	595 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LOC285556	D6RIA3	1793 aa		11.58	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MYOG	P15173	224 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CTNNB1	P35222	781 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	HAAO	P46952	286 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RXRG	P48443	463 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DAB2	P98082	770 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	OGDH	Q02218	1023 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PTPN11	Q06124	597 aa	Predicted RBP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ZNF697	Q5TEC3	545 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SIGIRR	Q6IA17	410 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SPOCD1	Q6ZMY3	1216 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PPP1R14C	Q8TAE6	165 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PGBD4	Q96DM1	585 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TTC25	Q96NG3	672 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAM49B	Q9NUQ9	324 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TRPM7	Q96QT4	1865 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CDH23	Q9H251	3354 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MEIS3P2	A8K0S8	358 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335		H7C0C1	242 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NVL	O15381	856 aa	Known RBP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LSM8	O95777	96 aa	Known RBP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	VAV1	P15498	845 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ASPA	P45381	313 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAAP100	Q0VG06	881 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CSTF3	Q12996	717 aa	Known RBP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LACTB2	Q53H82	288 aa	Predicted RBP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	HSPBAP1	Q96EW2	488 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	B3GALT6	Q96L58	329 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	HERC2P3	Q9BVR0	1158 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RNF39	Q9H2S5	420 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MARCH7	Q9H992	704 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CNOT10	Q9H9A5	744 aa	Known RBP	11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	OGDHL	Q9ULD0	1010 aa		11.58	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CCDC162P	A2VCL2	907 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	E2F3	O00716	465 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CST8	O60676	142 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TFPT	P0C1Z6	253 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TCF3	P15923	654 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CD83	Q01151	205 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LMNB2	Q03252	620 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	C4orf22	Q6V702	233 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	VASH1	Q7L8A9	365 aa	Predicted RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ANKS1B	Q7Z6G8	1248 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CROCCP2	Q86T23	111 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	OR7G1	Q8NGA0	311 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NELL1	Q92832	810 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SLITRK1	Q96PX8	696 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	XPO6	Q96QU8	1125 aa	Known RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TWNK	Q96RR1	684 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PRMT1	Q99873	361 aa	Known RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NGRN	Q9NPE2	291 aa	Known RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TBCCD1	Q9NVR7	557 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	HCST	Q9UBK5	93 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ANGPTL3	Q9Y5C1	460 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RECQL4	O94761	1208 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NUDT17	P0C025	328 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CPA3	P15088	417 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DRD4	P21917	467 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TMED2	Q15363	201 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RAVER1	Q8IY67	606 aa	Known RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SRRM1	Q8IYB3	904 aa	Known RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RIBC1	Q8N443	379 aa	Predicted RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	OR6B3	Q8NGW1	331 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TMEM176A	Q96HP8	235 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RBM14	Q96PK6	669 aa	Known RBP	11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms